RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 SLC35F5Q8WV83 523 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 TFAP2BQ92481 460 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 KAT5Q92993 513 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 PLD4Q96BZ4 506 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 KREMEN1Q96MU8 473 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 XPO6Q96QU8 1125 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 MED15Q96RN5 788 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 HINFPQ9BQA5 517 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 TRIM62Q9BVG3 475 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 ARHGEF4Q9NR80 690 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 ABCC13Q9NSE7 274 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 MARK1Q9P0L2 795 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 DEC1Q9P2X7 70 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 NCDNQ9UBB6 729 aa18.6■□□□□ 0.57
SHKBP1-204ENST00000594862 A0A0A0MRY4 1105 aa18.59■□□□□ 0.57
SHKBP1-204ENST00000594862 STC2O76061 302 aa18.59■□□□□ 0.57
SHKBP1-204ENST00000594862 KAT7O95251 611 aa18.59■□□□□ 0.57
SHKBP1-204ENST00000594862 BRD2P25440 801 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-204ENST00000594862 CHKAP35790 457 aa18.59■□□□□ 0.57
SHKBP1-204ENST00000594862 TNFRSF4P43489 277 aa18.59■□□□□ 0.57
SHKBP1-204ENST00000594862 EFEMP1Q12805 493 aa18.59■□□□□ 0.57
SHKBP1-204ENST00000594862 ETFBKMTQ8IXQ9 262 aa18.59■□□□□ 0.57
SHKBP1-204ENST00000594862 USP33Q8TEY7 942 aa18.59■□□□□ 0.57
SHKBP1-204ENST00000594862 GMEB2Q9UKD1 530 aa18.59■□□□□ 0.57
SHKBP1-204ENST00000594862 DNAH14Q0VDD8 3507 aa18.58■□□□□ 0.57
SHKBP1-204ENST00000594862 TULP2O00295 520 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 CACNG3O60359 315 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 GREM1O60565 184 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 APBB3O95704 486 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 EEF1GP26641 437 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 ACADSBP45954 432 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 FNTBP49356 437 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 ZNF445P59923 1031 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 FOXK2Q01167 660 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 NAIF1Q69YI7 327 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 LAIR1Q6GTX8 287 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 Q6ZNB5 142 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 RBM43Q6ZSC3 357 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 TRMT11Q7Z4G4 463 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 STK32AQ8WU08 396 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 EZH1Q92800 747 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 BBS2Q9BXC9 721 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 NUDT5Q9UKK9 219 aa18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 HBS1LQ9Y450 684 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-204ENST00000594862 K7EQS6 105 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 RNF225M0QZC1 329 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 MDM4O15151 490 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 TULP3O75386 442 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 DAOAP59103 153 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 DMC1Q14565 340 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 VWA3BQ502W6 1294 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 BSPRYQ5W0U4 402 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 GRAMD4Q6IC98 578 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 PKN3Q6P5Z2 889 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 TMEM25Q86YD3 366 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 TUBGCP2Q9BSJ2 902 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 CRACR2AQ9BSW2 395 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 NDST4Q9H3R1 872 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 MMP17Q9ULZ9 603 aa18.57■□□□□ 0.56
SHKBP1-204ENST00000594862 CACNA1AO00555 2505 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 SLC12A8A0AV02 714 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 LATS1O95835 1130 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 CYBBP04839 570 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 TPM2P07951 284 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 LCP1P13796 627 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 SLC9A1P19634 815 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 PON1P27169 355 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 GNA15P30679 374 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 HARS2P49590 506 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 KDSRQ06136 332 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 SIM2Q14190 667 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 E2F5Q15329 346 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 EOGTQ5NDL2 527 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 HEATR6Q6AI08 1181 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 PMF1Q6P1K2 205 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 BHLHA9Q7RTU4 235 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 C12orf40Q86WS4 652 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 TERB1Q8NA31 727 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 TSTD1Q8NFU3 115 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 SHC3Q92529 594 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 WBP2Q969T9 261 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 ZSWIM1Q9BR11 485 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 EBF1Q9UH73 591 aa18.56■□□□□ 0.56
SHKBP1-204ENST00000594862 TBC1D3BA6NDS4 549 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 YJEFN3A6XGL0 299 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 KCNJ18B7U540 433 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 E7ENQ6 273 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 NEDD8-MDP1E9PL57 170 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 THAP12O43422 761 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 LETM1O95202 739 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 TYRP14679 529 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 CORO1AP31146 461 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 SLC6A11P48066 632 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 RGS7P49802 495 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 DGKEP52429 567 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 KCNJ12Q14500 433 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 C2orf27AQ580R0 203 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 MSANTD2Q6P1R3 559 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 SASS6Q6UVJ0 657 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 PRR23BQ6ZRT6 265 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms