RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 C1orf54Q8WWF1 131 aa16■□□□□ 0.15
PNKP-204ENST00000594661 TMEM176AQ96HP8 235 aa16■□□□□ 0.15
PNKP-204ENST00000594661 ZNF184Q99676 751 aaPredicted RBP16■□□□□ 0.15
PNKP-204ENST00000594661 OXCT2Q9BYC2 517 aaPredicted RBP16■□□□□ 0.15
PNKP-204ENST00000594661 ROPN1BQ9BZX4 212 aaPredicted RBP16■□□□□ 0.15
PNKP-204ENST00000594661 ROPN1Q9HAT0 212 aaPredicted RBP16■□□□□ 0.15
PNKP-204ENST00000594661 PARVAQ9NVD7 372 aa16■□□□□ 0.15
PNKP-204ENST00000594661 RNF186Q9NXI6 227 aa16■□□□□ 0.15
PNKP-204ENST00000594661 GRHL1Q9NZI5 618 aa16■□□□□ 0.15
PNKP-204ENST00000594661 KLK14Q9P0G3 267 aa16■□□□□ 0.15
PNKP-204ENST00000594661 CYTH4Q9UIA0 394 aa16■□□□□ 0.15
PNKP-204ENST00000594661 CHMP2BQ9UQN3 213 aa16■□□□□ 0.15
PNKP-204ENST00000594661 TMEM98Q9Y2Y6 226 aa16■□□□□ 0.15
PNKP-204ENST00000594661 TCRBV5S1A1TA0A578 114 aa15.99■□□□□ 0.15
PNKP-204ENST00000594661 TLR3O15455 904 aaKnown RBP15.99■□□□□ 0.15
PNKP-204ENST00000594661 ADAMTS4O75173 837 aa15.99■□□□□ 0.15
PNKP-204ENST00000594661 RPL7AP62424 266 aaKnown RBP15.99■□□□□ 0.15
PNKP-204ENST00000594661 RCN1Q15293 331 aa15.99■□□□□ 0.15
PNKP-204ENST00000594661 TMEM259Q4ZIN3 620 aa15.99■□□□□ 0.15
PNKP-204ENST00000594661 PPFIBP2Q8ND30 876 aa15.99■□□□□ 0.15
PNKP-204ENST00000594661 ERP27Q96DN0 273 aa15.99■□□□□ 0.15
PNKP-204ENST00000594661 MAGEB18Q96M61 343 aa15.99■□□□□ 0.15
PNKP-204ENST00000594661 TGS1Q96RS0 853 aaKnown RBP15.99■□□□□ 0.15
PNKP-204ENST00000594661 ZNF518BQ9C0D4 1074 aa15.99■□□□□ 0.15
PNKP-204ENST00000594661 LRRC19Q9H756 370 aa15.99■□□□□ 0.15
PNKP-204ENST00000594661 CHKBQ9Y259 395 aa15.99■□□□□ 0.15
PNKP-204ENST00000594661 USTQ9Y2C2 406 aa15.99■□□□□ 0.15
PNKP-204ENST00000594661 CASP8AP2Q9UKL3 1982 aa15.99■□□□□ 0.15
PNKP-204ENST00000594661 PDCD11Q14690 1871 aaKnown RBP15.99■□□□□ 0.15
PNKP-204ENST00000594661 CALB1P05937 261 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 CD97P48960 835 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 SESN3P58005 492 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 INCA1Q0VD86 236 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 P3H1Q32P28 736 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 CYP4A22Q5TCH4 519 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 DUS1LQ6P1R4 473 aaKnown RBP15.98■□□□□ 0.15
PNKP-204ENST00000594661 SPATA24Q86W54 205 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 FEZF2Q8TBJ5 459 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 CAPNS2Q96L46 248 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 SPC25Q9HBM1 224 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 XPNPEP3Q9NQH7 507 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 TJP2Q9UDY2 1190 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 PARP2Q9UGN5 583 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 LNPEPQ9UIQ6 1025 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 MAP3K7O43318 606 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 MED7O43513 233 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 PSTPIP1O43586 416 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 UBTFL6P0CB48 400 aaPredicted RBP15.98■□□□□ 0.15
PNKP-204ENST00000594661 PRKAR2AP13861 404 aaKnown RBP15.98■□□□□ 0.15
PNKP-204ENST00000594661 VAV1P15498 845 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 GJC1P36383 396 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 NDST1P52848 882 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 OXCT1P55809 520 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 TAS2R40P59535 323 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 MRPS6P82932 125 aaKnown RBP15.98■□□□□ 0.15
PNKP-204ENST00000594661 SP3Q02447 781 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 PTPN20Q4JDL3 420 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 FAM47CQ5HY64 1035 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 RHOT1Q8IXI2 618 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 SMG8Q8ND04 991 aaKnown RBP15.98■□□□□ 0.15
PNKP-204ENST00000594661 BEST2Q8NFU1 509 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 MGARPQ8TDB4 240 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 LHX5Q9H2C1 402 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 ZNF212Q9UDV6 495 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 IPPQ9Y573 584 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 CDY2AQ9Y6F7 541 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 USH1CQ9Y6N9 552 aa15.98■□□□□ 0.15
PNKP-204ENST00000594661 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.97■□□□□ 0.15
PNKP-204ENST00000594661 HNRNPCL1O60812 293 aaKnown RBP15.97■□□□□ 0.15
PNKP-204ENST00000594661 HNRNPCP07910 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
PNKP-204ENST00000594661 CTSHP09668 335 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 ETS2P15036 469 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 PTPN4P29074 926 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 NKX3-2P78367 333 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 DNAJC24Q6P3W2 148 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 ARRDC4Q8NCT1 418 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 MCEEQ96PE7 176 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 LRRC37BQ96QE4 947 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 TUBGCP5Q96RT8 1024 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 HERPUD2Q9BSE4 406 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 EPB41L1Q9H4G0 881 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 STX18Q9P2W9 335 aaKnown RBP15.97■□□□□ 0.15
PNKP-204ENST00000594661 MTRF1LQ9UGC7 380 aaKnown RBP15.97■□□□□ 0.15
PNKP-204ENST00000594661 ITGB1BP2Q9UKP3 347 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 SNX9Q9Y5X1 595 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 CEP350Q5VT06 3117 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 SMIM28A0A1B0GU29 152 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 TMEM191CA6NGB0 347 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 DCTN3O75935 186 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 MICAL2O94851 1124 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 ASGR1P07306 291 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 ZNF252P-AS1Q0IIN9 211 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 C9orf57Q5W0N0 161 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 ATG4AQ8WYN0 398 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 HEXIM2Q96MH2 286 aaKnown RBP15.97■□□□□ 0.15
PNKP-204ENST00000594661 MRPL45Q9BRJ2 306 aaKnown RBP15.97■□□□□ 0.15
PNKP-204ENST00000594661 HEMGNQ9BXL5 484 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 SEMA4AQ9H3S1 761 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 CHST7Q9NS84 486 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 KRT82Q9NSB4 513 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms