RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 RXFP1Q9HBX9 757 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 ARFGAP3Q9NP61 516 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.82■□□□□ 0.12
VRK3-207ENST00000594092 HSFX1Q9UBD0 423 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 NR2E3Q9Y5X4 410 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 PLXNA3P51805 1871 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 PLXNA4Q9HCM2 1894 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 MYO16Q9Y6X6 1858 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 A0A1W2PQH9 124 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 MDM4O15151 490 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 TEX28O15482 410 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 CD48P09326 243 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 YWHAQP27348 245 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 RDXP35241 583 aaKnown RBP15.82■□□□□ 0.12
VRK3-207ENST00000594092 ARSEP51690 589 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 MRPS25P82663 173 aaKnown RBP15.82■□□□□ 0.12
VRK3-207ENST00000594092 SLC7A5Q01650 507 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 KLF1Q13351 362 aaPredicted RBP15.82■□□□□ 0.12
VRK3-207ENST00000594092 MTMR3Q13615 1198 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 TAZQ16635 292 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 FAM109BQ6ICB4 259 aaPredicted RBP15.82■□□□□ 0.12
VRK3-207ENST00000594092 MON1AQ86VX9 555 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 FAM131BQ86XD5 332 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 PRELID2Q8N945 189 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 KCTD6Q8NC69 237 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 ADAM32Q8TC27 787 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 GIPC2Q8TF65 315 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 HDAC7Q8WUI4 952 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 PGAP3Q96FM1 320 aaPredicted RBP15.82■□□□□ 0.12
VRK3-207ENST00000594092 NMUR1Q9HB89 426 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 ABCC13Q9NSE7 274 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 GPATCH2LQ9NWQ4 482 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 DMGDHQ9UI17 866 aaKnown RBP15.82■□□□□ 0.12
VRK3-207ENST00000594092 SSX2IPQ9Y2D8 614 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 hCG_1818297A0A087WSY0 165 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 SYNJ2BP-COX16A0A087WUM0 186 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 GRXCR1A8MXD5 290 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 RAD51CO43502 376 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 ARHGEF15O94989 841 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 HEXIM1O94992 359 aaKnown RBP15.81■□□□□ 0.12
VRK3-207ENST00000594092 KRT10P13645 584 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 MYOGP15173 224 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 CREMQ03060 361 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 DEUP1Q05D60 604 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 NME3Q13232 169 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 SHHQ15465 462 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 MAP9Q49MG5 647 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 ZC3H12AQ5D1E8 599 aaKnown RBP15.81■□□□□ 0.12
VRK3-207ENST00000594092 TFDP3Q5H9I0 405 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 ERMARDQ5T6L9 678 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 BTBD8Q5XKL5 378 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 MAATS1Q7Z4T9 603 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 CCDC185Q8N715 623 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 CEP295NLQ96MC4 621 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 CYP4F11Q9HBI6 524 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 PIGVQ9NUD9 493 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 COMMD8Q9NX08 183 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 COX16Q9P0S2 106 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 GMIPQ9P107 970 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 LZTS1Q9Y250 596 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 RWDD3Q9Y3V2 267 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 GREB1Q4ZG55 1949 aa15.81■□□□□ 0.12
VRK3-207ENST00000594092 SLC38A8A6NNN8 435 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 PHF2O75151 1096 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 ZMYND10O75800 440 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 CXCL14O95715 111 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 CNPP09543 421 aaKnown RBP15.8■□□□□ 0.12
VRK3-207ENST00000594092 CDH6P55285 790 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 ADCY2Q08462 1091 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 CA9Q16790 459 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 KAZNQ674X7 775 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 TMC7Q7Z402 723 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 SPRED2Q7Z698 418 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 TAC4Q86UU9 113 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 IFT20Q8IY31 132 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 DQX1Q8TE96 717 aaKnown RBP15.8■□□□□ 0.12
VRK3-207ENST00000594092 FBXO32Q969P5 355 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 C17orf80Q9BSJ5 609 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 FAM204AQ9H8W3 233 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 WDR6Q9NNW5 1121 aaKnown RBP15.8■□□□□ 0.12
VRK3-207ENST00000594092 ALG13Q9NP73 1137 aaKnown RBP15.8■□□□□ 0.12
VRK3-207ENST00000594092 DDIT4Q9NX09 232 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 OSER1Q9NX31 292 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 ZNF638Q14966 1978 aaKnown RBP15.8■□□□□ 0.12
VRK3-207ENST00000594092 CHRNA3P32297 505 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 CA8P35219 290 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 TAF10Q12962 218 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 DPYSL3Q14195 570 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 CYP1B1Q16678 543 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 ARHGAP18Q8N392 663 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 RUNDC3BQ96NL0 473 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 TTLL2Q9BWV7 592 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.8■□□□□ 0.12
VRK3-207ENST00000594092 AMACRQ9UHK6 382 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 FZD10Q9ULW2 581 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 AP4E1Q9UPM8 1137 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 EFR3BQ9Y2G0 817 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 YIPF1Q9Y548 306 aa15.8■□□□□ 0.12
VRK3-207ENST00000594092 CEP290O15078 2479 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms