RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 VPS52Q8N1B4 723 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 NUP93Q8N1F7 819 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 ARFGAP1Q8N6T3 406 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 CENPIQ92674 756 aaPredicted RBP14.07□□□□□ -0.16
VMP1-217ENST00000593168 FAM149B1Q96BN6 582 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 MS4A14Q96JA4 679 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 PGLYRP2Q96PD5 576 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 SLC2A13Q96QE2 648 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 CLSTN3Q9BQT9 956 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.07□□□□□ -0.16
VMP1-217ENST00000593168 FAM86C1Q9NVL1 165 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 COMMD8Q9NX08 183 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 HSFX1Q9UBD0 423 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 PLXNA3P51805 1871 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 MYO15AQ9UKN7 3530 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 WDR27A2RRH5 827 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 ADAM12O43184 909 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 CTIFO43310 598 aaKnown RBP14.06□□□□□ -0.16
VMP1-217ENST00000593168 LILRB3O75022 631 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 ABLIM3O94929 683 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 VNN2O95498 520 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 USP17L7P0C7H9 530 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 PYGMP11217 842 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 SSR1P43307 286 aaKnown RBP14.06□□□□□ -0.16
VMP1-217ENST00000593168 SLC5A3P53794 718 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 VCPP55072 806 aaKnown RBP14.06□□□□□ -0.16
VMP1-217ENST00000593168 RAB33AQ14088 237 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 BHLHA9Q7RTU4 235 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 RCOR2Q8IZ40 523 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 DEFB106AQ8N104 65 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 VN1R2Q8NFZ6 395 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 EXD1Q8NHP7 514 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 ZNF461Q8TAF7 563 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 NDRG1Q92597 394 aaKnown RBP14.06□□□□□ -0.16
VMP1-217ENST00000593168 NT5C3BQ969T7 300 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 SPATA17Q96L03 361 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 NAP1L3Q99457 506 aaPredicted RBP14.06□□□□□ -0.16
VMP1-217ENST00000593168 PRRX2Q99811 253 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 TRIM62Q9BVG3 475 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 PHF7Q9BWX1 381 aaPredicted RBP14.06□□□□□ -0.16
VMP1-217ENST00000593168 ZBP1Q9H171 429 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 FBXO44Q9H4M3 255 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 POPDC2Q9HBU9 364 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 RXFP1Q9HBX9 757 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 MRPL17Q9NRX2 175 aaKnown RBP14.06□□□□□ -0.16
VMP1-217ENST00000593168 DDX56Q9NY93 547 aaKnown RBP14.06□□□□□ -0.16
VMP1-217ENST00000593168 RRN3Q9NYV6 651 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 IL37Q9NZH6 218 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 FNIP2Q9P278 1114 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 AFF4Q9UHB7 1163 aaKnown RBP14.06□□□□□ -0.16
VMP1-217ENST00000593168 MAFFQ9ULX9 164 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 STAP1Q9ULZ2 295 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 PATJQ8NI35 1801 aa14.06□□□□□ -0.16
VMP1-217ENST00000593168 YJEFN3A6XGL0 299 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 E7ENQ6 273 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 PGRMC1O00264 195 aaKnown RBP14.05□□□□□ -0.16
VMP1-217ENST00000593168 C2CD2LO14523 706 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 PER2O15055 1255 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 TADA3O75528 432 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 ENDOD1O94919 500 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 ZRANB2O95218 330 aaKnown RBP eCLIP14.05□□□□□ -0.16
VMP1-217ENST00000593168 TRUB2O95900 331 aaKnown RBP14.05□□□□□ -0.16
VMP1-217ENST00000593168 LTFP02788 710 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 FYNP06241 537 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 CTSAP10619 480 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 RPL17P18621 184 aaKnown RBP14.05□□□□□ -0.16
VMP1-217ENST00000593168 MIPP30301 263 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 TUFMP49411 452 aaKnown RBP14.05□□□□□ -0.16
VMP1-217ENST00000593168 RPL10AP62906 217 aaKnown RBP14.05□□□□□ -0.16
VMP1-217ENST00000593168 SLC25A11Q02978 314 aaKnown RBP14.05□□□□□ -0.16
VMP1-217ENST00000593168 SIGLEC14Q08ET2 396 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 DUSP4Q13115 394 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 DDR2Q16832 855 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 C15orf59Q2T9L4 293 aaPredicted RBP14.05□□□□□ -0.16
VMP1-217ENST00000593168 SLC25A52Q3SY17 297 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 MGAT5BQ3V5L5 792 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 BOLA3Q53S33 107 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 SEL1L2Q5TEA6 688 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 DAB2IPQ5VWQ8 1189 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 STRADAQ7RTN6 431 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 SPATA4Q8NEY3 305 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 FAM172AQ8WUF8 416 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 GOLGA1Q92805 767 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 ASIC4Q96FT7 647 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 CFAP57Q96MR6 1250 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 NPY6RQ99463 290 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 TLE6Q9H808 572 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 USP18Q9UMW8 372 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 LZTS1Q9Y250 596 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 SLC27A5Q9Y2P5 690 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 DMDP11532 3685 aa14.05□□□□□ -0.16
VMP1-217ENST00000593168 CFAP54Q96N23 3096 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 FAM92AA1XBS5 289 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 PRPSAP2O60256 369 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 RTN3O95197 1032 aaPredicted RBP14.04□□□□□ -0.16
VMP1-217ENST00000593168 FGGP02679 453 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 ATF2P15336 505 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 TCF4P15884 667 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 CETN2P41208 172 aa14.04□□□□□ -0.16
VMP1-217ENST00000593168 COPS2P61201 443 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms