RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 PPM1NQ8N819 430 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 GSDMBQ8TAX9 411 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 PIWIL1Q96J94 861 aaKnown RBP12.04□□□□□ -0.48
ZNF540-210ENST00000592533 SIGLEC10Q96LC7 697 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 NMUR2Q9GZQ4 415 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 NMRK1Q9NWW6 199 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 TSPAN16Q9UKR8 245 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 FAM237BA0A1B0GVD1 139 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 NOP56O00567 594 aaKnown RBP12.04□□□□□ -0.48
ZNF540-210ENST00000592533 CNTFP26441 200 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 SLC34A1Q06495 639 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 BST1Q10588 318 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 GRIK3Q13003 919 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 SLC10A6Q3KNW5 377 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 CES4AQ5XG92 561 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 STEAP4Q687X5 459 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 TMEM110Q86TL2 294 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 TTC7BQ86TV6 843 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 UBA3Q8TBC4 463 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 KHSRPQ92945 711 aaKnown RBP eCLIP12.04□□□□□ -0.48
ZNF540-210ENST00000592533 E2F7Q96AV8 911 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 SPDL1Q96EA4 605 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 EBNA1BP2Q99848 306 aaKnown RBP12.04□□□□□ -0.48
ZNF540-210ENST00000592533 C11orf84Q9BUA3 381 aaPredicted RBP12.04□□□□□ -0.48
ZNF540-210ENST00000592533 DNAJC25-GNG10A0A024R161 153 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 HMX2A2RU54 273 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 H0Y3Z8 333 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 CNMDO75829 334 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 GJB1P08034 283 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 KPNB1Q14974 876 aaKnown RBP12.03□□□□□ -0.48
ZNF540-210ENST00000592533 TMEM132DQ14C87 1099 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 RCN1Q15293 331 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 OR6B2Q6IFH4 312 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 TMPRSS6Q8IU80 811 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 ZDHHC17Q8IUH5 632 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 MCUR1Q96AQ8 359 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 NT5C1AQ9BXI3 368 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 WWP1Q9H0M0 922 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 PLA2G4CQ9UP65 541 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 ZNF236Q9UL36 1845 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 USP2O75604 605 aaPredicted RBP12.03□□□□□ -0.48
ZNF540-210ENST00000592533 CSH1P0DML2 217 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 CSH2P0DML3 217 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 NR2C2P49116 596 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 CLCN3P51790 818 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 DPYSL2Q16555 572 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 IRGCQ6NXR0 463 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 APBB1IPQ7Z5R6 666 aaPredicted RBP12.03□□□□□ -0.48
ZNF540-210ENST00000592533 CDR2LQ86X02 465 aaPredicted RBP12.03□□□□□ -0.48
ZNF540-210ENST00000592533 VPS52Q8N1B4 723 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 MICAL1Q8TDZ2 1067 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 TRAPPC12Q8WVT3 735 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 NRG4Q8WWG1 115 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 SNRNP25Q9BV90 132 aaKnown RBP12.03□□□□□ -0.48
ZNF540-210ENST00000592533 C1orf21Q9H246 121 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 XAB2Q9HCS7 855 aaKnown RBP12.03□□□□□ -0.48
ZNF540-210ENST00000592533 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.03□□□□□ -0.48
ZNF540-210ENST00000592533 ZNF212Q9UDV6 495 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 SORCS3Q9UPU3 1222 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 LRCH1Q9Y2L9 728 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 PCDHA11Q9Y5I1 949 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 GJA3Q9Y6H8 435 aa12.03□□□□□ -0.48
ZNF540-210ENST00000592533 PEX10O60683 326 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 ECM2O94769 699 aaPredicted RBP12.02□□□□□ -0.48
ZNF540-210ENST00000592533 ALDH1A2O94788 518 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 SLC25A27O95847 323 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 BPGMP07738 259 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 LINGO3P0C6S8 592 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 PTPN9P43378 593 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 PSEN1P49768 467 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 RBP5P82980 135 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 SLC6A3Q01959 620 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 WASHC5Q12768 1159 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 SEMA5AQ13591 1074 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 TMEM132AQ24JP5 1023 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 ZNF484Q5JVG2 852 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 SNX30Q5VWJ9 437 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 NCAPG2Q86XI2 1143 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 CTAGE3PQ8IX95 158 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 TMEM130Q8N3G9 435 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 FAM172AQ8WUF8 416 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 CENPIQ92674 756 aaPredicted RBP12.02□□□□□ -0.48
ZNF540-210ENST00000592533 SPATA33Q96N06 139 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 QKIQ96PU8 341 aaKnown RBP eCLIP12.02□□□□□ -0.48
ZNF540-210ENST00000592533 GCOM2Q9BZD3 368 aaPredicted RBP12.02□□□□□ -0.48
ZNF540-210ENST00000592533 NRDE2Q9H7Z3 1164 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 MOCS1Q9NZB8 636 aa12.02□□□□□ -0.48
ZNF540-210ENST00000592533 KRT36O76013 467 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 APRTP07741 180 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 NEFHP12036 1026 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 ZFXP17010 805 aaPredicted RBP12.02□□□□□ -0.49
ZNF540-210ENST00000592533 CDC25CP30307 473 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 SCNN1AP37088 669 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 AP1B1Q10567 949 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 VGLL4Q14135 290 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 KYAT3Q6YP21 454 aaKnown RBP12.02□□□□□ -0.49
ZNF540-210ENST00000592533 NET1Q7Z628 596 aaPredicted RBP12.02□□□□□ -0.49
ZNF540-210ENST00000592533 ALYREFQ86V81 257 aaKnown RBP12.02□□□□□ -0.49
ZNF540-210ENST00000592533 SESTD1Q86VW0 696 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 CCDC110Q8TBZ0 833 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms