RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 MTM1Q13496 603 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 FAM182AQ5T1J6 154 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 BNIPLQ7Z465 357 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 PACS2Q86VP3 889 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 CDKL3Q8IVW4 592 aaPredicted RBP16.37■□□□□ 0.21
MBD1-227ENST00000592060 GSTCDQ8NEC7 633 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 DCAKDQ8WVC6 231 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 WNT8BQ93098 351 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 MTG1Q9BT17 334 aaPredicted RBP16.37■□□□□ 0.21
MBD1-227ENST00000592060 RAB6BQ9NRW1 208 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 ZNF638Q14966 1978 aaKnown RBP16.36■□□□□ 0.21
MBD1-227ENST00000592060 A0A1W2PPM1 405 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 CLDN5O00501 218 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 TYROBPO43914 113 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 MAP3K6O95382 1288 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 C6orf222P0C671 652 aaPredicted RBP16.36■□□□□ 0.21
MBD1-227ENST00000592060 ZFXP17010 805 aaPredicted RBP16.36■□□□□ 0.21
MBD1-227ENST00000592060 NPR3P17342 541 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 PTPN1P18031 435 aaKnown RBP16.36■□□□□ 0.21
MBD1-227ENST00000592060 ACAT1P24752 427 aaKnown RBP16.36■□□□□ 0.21
MBD1-227ENST00000592060 GJA9P57773 515 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 YWHAZP63104 245 aaKnown RBP16.36■□□□□ 0.21
MBD1-227ENST00000592060 GBE1Q04446 702 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 SLC10A2Q12908 348 aaPredicted RBP16.36■□□□□ 0.21
MBD1-227ENST00000592060 XRCC4Q13426 336 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 KIAA0319Q5VV43 1072 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 WSCD1Q658N2 575 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 NUGGCQ68CJ6 796 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 PALM2Q8IXS6 379 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 DEFB106AQ8N104 65 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 KCTD13Q8WZ19 329 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 MRRFQ96E11 262 aaKnown RBP16.36■□□□□ 0.21
MBD1-227ENST00000592060 QKIQ96PU8 341 aaKnown RBP eCLIP16.36■□□□□ 0.21
MBD1-227ENST00000592060 CSPG4P5Q96PW8 444 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 SMC6Q96SB8 1091 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 SSU72Q9NP77 194 aaKnown RBP16.36■□□□□ 0.21
MBD1-227ENST00000592060 ETNK2Q9NVF9 386 aa16.36■□□□□ 0.21
MBD1-227ENST00000592060 KBTBD13C9JR72 458 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 BEST1O76090 585 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 SLC10A3P09131 477 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 CYBAP13498 195 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 IL9RQ01113 521 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 SF3A3Q12874 501 aaKnown RBP eCLIP16.35■□□□□ 0.213e-8■■■■■ 54.4
MBD1-227ENST00000592060 SLC25A52Q3SY17 297 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 TTC31Q49AM3 519 aaPredicted RBP16.35■□□□□ 0.21
MBD1-227ENST00000592060 SLC45A4Q5BKX6 768 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 NCBP2-AS2Q69YL0 99 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 CGB2Q6NT52 195 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 RGMBQ6NW40 437 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 CNPY4Q8N129 248 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 C4orf33Q8N1A6 199 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 NDRG1Q92597 394 aaKnown RBP16.35■□□□□ 0.21
MBD1-227ENST00000592060 FRMD8Q9BZ67 464 aaPredicted RBP16.35■□□□□ 0.21
MBD1-227ENST00000592060 ZFYVE28Q9HCC9 887 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 FAM105AQ9NUU6 356 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 CACNG4Q9UBN1 327 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 FZD10Q9ULW2 581 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 ST3GAL5Q9UNP4 418 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 USP15Q9Y4E8 981 aaPredicted RBP16.35■□□□□ 0.21
MBD1-227ENST00000592060 NR2C2P49116 596 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 SULT1E1P49888 294 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 NBPF20Q3BBV1 942 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 FAXCQ5TGI0 409 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 GDF6Q6KF10 455 aaPredicted RBP16.35■□□□□ 0.21
MBD1-227ENST00000592060 C4orf22Q6V702 233 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 CLEC20AQ6ZU45 233 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 LRRN4Q8WUT4 740 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 NT5C3BQ969T7 300 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 SENP6Q9GZR1 1112 aaPredicted RBP16.35■□□□□ 0.21
MBD1-227ENST00000592060 UPF3AQ9H1J1 476 aaKnown RBP16.35■□□□□ 0.21
MBD1-227ENST00000592060 TSPYL2Q9H2G4 693 aaPredicted RBP16.35■□□□□ 0.21
MBD1-227ENST00000592060 NMRK2Q9NPI5 230 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 GRID1Q9ULK0 1009 aa16.35■□□□□ 0.21
MBD1-227ENST00000592060 M0QZ92 97 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 GCATO75600 419 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 C1QAP02745 245 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 ATP2A2P16615 1042 aaKnown RBP16.34■□□□□ 0.21
MBD1-227ENST00000592060 MLH1P40692 756 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 SCTRP47872 440 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 PITX1P78337 314 aaPredicted RBP16.34■□□□□ 0.21
MBD1-227ENST00000592060 MRPS5P82675 430 aaKnown RBP16.34■□□□□ 0.21
MBD1-227ENST00000592060 CRHR2Q13324 411 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 ZKSCAN8Q15776 578 aaPredicted RBP16.34■□□□□ 0.21
MBD1-227ENST00000592060 MDH1BQ5I0G3 518 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 SYCP2LQ5T4T6 812 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 RGS9BPQ6ZS82 235 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 SAPCD2Q86UD0 394 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 CCDC110Q8TBZ0 833 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 OLFM3Q96PB7 478 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 SLC2A13Q96QE2 648 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 KLC2Q9H0B6 622 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 ETNK1Q9HBU6 452 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 PNPLA8Q9NP80 782 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 CRTAC1Q9NQ79 661 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 SLC38A7Q9NVC3 462 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 RCOR3Q9P2K3 495 aaPredicted RBP16.34■□□□□ 0.21
MBD1-227ENST00000592060 MFHAS1Q9Y4C4 1052 aa16.34■□□□□ 0.21
MBD1-227ENST00000592060 TCRBV9S1A1TA0A576 114 aa16.33■□□□□ 0.21
MBD1-227ENST00000592060 AVILO75366 819 aa16.33■□□□□ 0.21
MBD1-227ENST00000592060 SPAG6O75602 509 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms