RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PIDD1Q9HB75 910 aa6.78□□□□□ -1.32
VPS4B-205ENST00000591383 SIX2Q9NPC8 291 aa6.78□□□□□ -1.32
VPS4B-205ENST00000591383 NLRC4Q9NPP4 1024 aa6.78□□□□□ -1.32
VPS4B-205ENST00000591383 PRDM6Q9NQX0 595 aa6.78□□□□□ -1.32
VPS4B-205ENST00000591383 THEGQ9P2T0 379 aa6.78□□□□□ -1.32
VPS4B-205ENST00000591383 AFF4Q9UHB7 1163 aaKnown RBP6.78□□□□□ -1.32
VPS4B-205ENST00000591383 DPP7Q9UHL4 492 aa6.78□□□□□ -1.32
VPS4B-205ENST00000591383 CDH22Q9UJ99 828 aa6.78□□□□□ -1.32
VPS4B-205ENST00000591383 DNAJC12Q9UKB3 198 aa6.78□□□□□ -1.32
VPS4B-205ENST00000591383 SIK3Q9Y2K2 1263 aa6.78□□□□□ -1.32
VPS4B-205ENST00000591383 MSRB2Q9Y3D2 182 aa6.78□□□□□ -1.32
VPS4B-205ENST00000591383 OBSL1O75147 1896 aa6.78□□□□□ -1.32
VPS4B-205ENST00000591383 UNC80Q8N2C7 3258 aa6.78□□□□□ -1.32
VPS4B-205ENST00000591383 FAM170AA1A519 330 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 F8VZ95 297 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 THAP12O43422 761 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 NCK2O43639 380 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 GFPT2O94808 682 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 VNN2O95498 520 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 FAM200BP0CF97 657 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 ATF2P15336 505 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 UCHL3P15374 230 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 ATF6P18850 670 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 ACO1P21399 889 aaKnown RBP6.77□□□□□ -1.33
VPS4B-205ENST00000591383 NME2P22392 152 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 SP100P23497 879 aaPredicted RBP6.77□□□□□ -1.33
VPS4B-205ENST00000591383 BDNFP23560 247 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 CYP2F1P24903 491 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 ALDH1A3P47895 512 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 GPR15P49685 360 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 PDE6CP51160 858 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 RAD23BP54727 409 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 TFF2Q03403 129 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 KCNMA1Q12791 1236 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 GPR17Q13304 367 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 SEPT6Q14141 434 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 DRAP1Q14919 205 aaPredicted RBP6.77□□□□□ -1.33
VPS4B-205ENST00000591383 TAF12Q16514 161 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 ZNF423Q2M1K9 1284 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 SGO2Q562F6 1265 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 KLHDC7AQ5VTJ3 777 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 GET4Q7L5D6 327 aaPredicted RBP6.77□□□□□ -1.33
VPS4B-205ENST00000591383 LRRTM3Q86VH5 581 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 GAS2L3Q86XJ1 694 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 TCEAL8Q8IYN2 117 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 UBR7Q8N806 425 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 C12orf29Q8N999 325 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 SLC4A11Q8NBS3 891 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 ZNF461Q8TAF7 563 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 MYCBPAPQ8TBZ2 947 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 STK35Q8TDR2 534 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 WHAMMQ8TF30 809 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 C2orf15Q8WU43 125 aaKnown RBP6.77□□□□□ -1.33
VPS4B-205ENST00000591383 SHC3Q92529 594 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 GTPBP3Q969Y2 492 aaKnown RBP6.77□□□□□ -1.33
VPS4B-205ENST00000591383 SMARCD1Q96GM5 515 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 PCED1BQ96HM7 432 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 TMEM176AQ96HP8 235 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 FAM81BQ96LP2 452 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 HEXIM2Q96MH2 286 aaKnown RBP6.77□□□□□ -1.33
VPS4B-205ENST00000591383 NAP1L5Q96NT1 182 aaPredicted RBP6.77□□□□□ -1.33
VPS4B-205ENST00000591383 GCNAQ96QF7 691 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 FERD3LQ96RJ6 166 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 ERGIC2Q96RQ1 377 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 PKMYT1Q99640 499 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 B3GNT5Q9BYG0 378 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 TRIM5Q9C035 493 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 PLEKHA4Q9H4M7 779 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 DMAP1Q9NPF5 467 aaPredicted RBP6.77□□□□□ -1.33
VPS4B-205ENST00000591383 ATP13A2Q9NQ11 1180 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 DNAJB12Q9NXW2 375 aaKnown RBP6.77□□□□□ -1.33
VPS4B-205ENST00000591383 CD207Q9UJ71 328 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 MAGED2Q9UNF1 606 aaPredicted RBP6.77□□□□□ -1.33
VPS4B-205ENST00000591383 CYP8B1Q9UNU6 501 aa6.77□□□□□ -1.33
VPS4B-205ENST00000591383 USP15Q9Y4E8 981 aaPredicted RBP6.77□□□□□ -1.33
VPS4B-205ENST00000591383 CCDC195A0A1B0GUA6 201 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 F8VP50 259 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 CYP26A1O43174 497 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 SMNDC1O75940 238 aaKnown RBP eCLIP6.76□□□□□ -1.33
VPS4B-205ENST00000591383 ABLIM3O94929 683 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 B3GALT4O96024 378 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 MYL4P12829 197 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 GRIK1P39086 918 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 ZNF132P52740 706 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 CACNA2D1P54289 1103 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 BCAT1P54687 386 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 EPHB3P54753 998 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 RPL10AP62906 217 aaKnown RBP6.76□□□□□ -1.33
VPS4B-205ENST00000591383 NTHL1P78549 312 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 CTBSQ01459 385 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 PCDH1Q08174 1060 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 SMARCB1Q12824 385 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 ADAM15Q13444 863 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 SMAD4Q13485 552 aaKnown RBP6.76□□□□□ -1.33
VPS4B-205ENST00000591383 ASIC2Q16515 512 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 PCSK7Q16549 785 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 DDR2Q16832 855 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 PKDCCQ504Y2 493 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 TAF3Q5VWG9 929 aa6.76□□□□□ -1.33
VPS4B-205ENST00000591383 FBXW10Q5XX13 1052 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms