RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 KIF11P52732 1056 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 ZNF132P52740 706 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 RAB15P59190 212 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 YWHAEP62258 255 aaKnown RBP11.82□□□□□ -0.52
SMAD4-211ENST00000590499 GCNT1Q02742 428 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 CETN1Q12798 172 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 RUNX3Q13761 415 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 PDGFRLQ15198 375 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 ANGPT1Q15389 498 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 XP32Q5T750 250 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 TTC30AQ86WT1 665 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 ARHGEF19Q8IW93 802 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 MAML2Q8IZL2 1156 aaPredicted RBP11.82□□□□□ -0.52
SMAD4-211ENST00000590499 ANKRD52Q8NB46 1076 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 TTC8Q8TAM2 541 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 OSCP1Q8WVF1 389 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 UBXN6Q9BZV1 441 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 INTS2Q9H0H0 1204 aaKnown RBP11.82□□□□□ -0.52
SMAD4-211ENST00000590499 IRF2BPLQ9H1B7 796 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 CHRDQ9H2X0 955 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 EBF3Q9H4W6 596 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 THAP9Q9H5L6 903 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 CCSER2Q9H7U1 834 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 CHORDC1Q9UHD1 332 aaPredicted RBP11.82□□□□□ -0.52
SMAD4-211ENST00000590499 SCML2Q9UQR0 700 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 CPQQ9Y646 472 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 USP3Q9Y6I4 520 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 FAM186AA6NE01 2351 aa11.82□□□□□ -0.52
SMAD4-211ENST00000590499 KIAA1549LQ6ZVL6 1849 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 LEFTY2O00292 366 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 O00370 1275 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 CYP26A1O43174 497 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 ABL1P00519 1130 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 CHRNB1P11230 501 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 EML3Q32P44 896 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 RAB41Q5JT25 222 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 HECTD3Q5T447 861 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 CC2D1AQ6P1N0 951 aaPredicted RBP11.81□□□□□ -0.52
SMAD4-211ENST00000590499 CCDC186Q7Z3E2 898 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 C1orf210Q8IVY1 113 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 PPM1KQ8N3J5 372 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 JAKMIP2Q96AA8 810 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 KREMEN1Q96MU8 473 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 ZSWIM1Q9BR11 485 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 NMUR1Q9HB89 426 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 CYLDQ9NQC7 956 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 FAM86C1Q9NVL1 165 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 OSER1Q9NX31 292 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 DUS2Q9NX74 493 aaKnown RBP11.81□□□□□ -0.52
SMAD4-211ENST00000590499 NDRG2Q9UN36 371 aaKnown RBP11.81□□□□□ -0.52
SMAD4-211ENST00000590499 CNTN6Q9UQ52 1028 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 WNT6Q9Y6F9 365 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 ATG2BQ96BY7 2078 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 CFAP54Q96N23 3096 aa11.81□□□□□ -0.52
SMAD4-211ENST00000590499 GTPBP10A4D1E9 387 aaKnown RBP11.8□□□□□ -0.52
SMAD4-211ENST00000590499 TTLL8A6PVC2 850 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 TULP2O00295 520 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 NCAM2O15394 837 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 TLR5O60602 858 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 PAEPP09466 180 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 MBL2P11226 248 aaPredicted RBP11.8□□□□□ -0.52
SMAD4-211ENST00000590499 VDRP11473 427 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 IFNAR2P48551 515 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 CCINQ13939 588 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 GAS6Q14393 721 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 GOLGA7BQ2TAP0 167 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 SGO2Q562F6 1265 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 CT47A1Q5JQC4 288 aaPredicted RBP11.8□□□□□ -0.52
SMAD4-211ENST00000590499 TRIM65Q6PJ69 517 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 TMEM270Q6UE05 265 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 RRAGAQ7L523 313 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 SCD5Q86SK9 330 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 PIGZQ86VD9 579 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 TFAP2BQ92481 460 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 ATP2A3Q93084 1043 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 IER2Q9BTL4 223 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 LINC00597Q9H2U6 94 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 ECT2Q9H8V3 914 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 PRMT8Q9NR22 394 aaPredicted RBP11.8□□□□□ -0.52
SMAD4-211ENST00000590499 TLR8Q9NR97 1041 aaKnown RBP11.8□□□□□ -0.52
SMAD4-211ENST00000590499 TMPRSS4Q9NRS4 437 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 SMPD4Q9NXE4 827 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 TSPAN16Q9UKR8 245 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 KIAA1257Q9ULG3 409 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 GPR179Q6PRD1 2367 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 OTOGLQ3ZCN5 2332 aa11.8□□□□□ -0.52
SMAD4-211ENST00000590499 GVINP1Q7Z2Y8 2422 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 A0A1W2PQH9 124 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 PROB1E7EW31 1015 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 GOLGA6L22H0YM25 854 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 TRDMT1O14717 391 aaKnown RBP11.79□□□□□ -0.52
SMAD4-211ENST00000590499 XPO1O14980 1071 aaKnown RBP11.79□□□□□ -0.52
SMAD4-211ENST00000590499 CD19P15391 556 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 GJA4P35212 333 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 NBL1P41271 181 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 BCAT1P54687 386 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 FOXK2Q01167 660 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 PDE4CQ08493 712 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 MTAPQ13126 283 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 PON2Q15165 354 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms