RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 ARHGEF4Q9NR80 690 aa18.9■□□□□ 0.62
CIRBP-227ENST00000590188 SAMSN1Q9NSI8 373 aaKnown RBP18.9■□□□□ 0.62
CIRBP-227ENST00000590188 MARCH2Q9P0N8 246 aa18.9■□□□□ 0.62
CIRBP-227ENST00000590188 AJAP1Q9UKB5 411 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-227ENST00000590188 SMG5Q9UPR3 1016 aaKnown RBP18.9■□□□□ 0.62
CIRBP-227ENST00000590188 PIEZO1Q92508 2521 aa18.9■□□□□ 0.62
CIRBP-227ENST00000590188 ZFHX2Q9C0A1 2572 aaPredicted RBP18.89■□□□□ 0.62
CIRBP-227ENST00000590188 YJEFN3A6XGL0 299 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 E7ENQ6 273 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 THAP12O43422 761 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 GABBR2O75899 941 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 LETM1O95202 739 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-227ENST00000590188 KAT7O95251 611 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 PAPSS2O95340 614 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-227ENST00000590188 APODP05090 189 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 PON1P27169 355 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 TIE1P35590 1138 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 STILQ15468 1287 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 DENND1BQ6P3S1 775 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 CCDC33Q8N5R6 958 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 SLC35F5Q8WV83 523 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 KCTD13Q8WZ19 329 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 CDK5RAP1Q96SZ6 601 aaKnown RBP18.89■□□□□ 0.61
CIRBP-227ENST00000590188 BBS2Q9BXC9 721 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 MIS12Q9H081 205 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 APEX2Q9UBZ4 518 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 SFMBT1Q9UHJ3 866 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 STRIP2Q9ULQ0 834 aa18.89■□□□□ 0.61
CIRBP-227ENST00000590188 KCNJ18B7U540 433 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 HOXC11O43248 304 aaPredicted RBP18.88■□□□□ 0.61
CIRBP-227ENST00000590188 HRO43593 1189 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 KLKB1P03952 638 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 GNA15P30679 374 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 CORO1AP31146 461 aaKnown RBP18.88■□□□□ 0.61
CIRBP-227ENST00000590188 DAOAP59103 153 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 KCNJ12Q14500 433 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 DMC1Q14565 340 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 VWA3BQ502W6 1294 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 EMC10Q5UCC4 262 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 BSPRYQ5W0U4 402 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 Q6ZNB5 142 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 LONP2Q86WA8 852 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 USP33Q8TEY7 942 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 RNF139Q8WU17 664 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 TUBGCP2Q9BSJ2 902 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 EPC1Q9H2F5 836 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 NDST4Q9H3R1 872 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 ST7Q9NRC1 585 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 PLK2Q9NYY3 685 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 NCDNQ9UBB6 729 aa18.88■□□□□ 0.61
CIRBP-227ENST00000590188 BECN2A8MW95 431 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-227ENST00000590188 TULP3O75386 442 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 PNMA6AP0CW24 399 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-227ENST00000590188 TYRP14679 529 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 COG7P83436 770 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 MIIPQ5JXC2 388 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 ENOSF1Q7L5Y1 443 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 DENND1CQ8IV53 801 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 FMNL3Q8IVF7 1028 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 ETFBKMTQ8IXQ9 262 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 ZNF276Q8N554 614 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 ACDQ96AP0 544 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 SIX2Q9NPC8 291 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 CNGB3Q9NQW8 809 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 DNAJC17Q9NVM6 304 aaKnown RBP18.87■□□□□ 0.61
CIRBP-227ENST00000590188 TAB2Q9NYJ8 693 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 DEC1Q9P2X7 70 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 DNAJC12Q9UKB3 198 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 CNTN6Q9UQ52 1028 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 NFE2L3Q9Y4A8 694 aa18.87■□□□□ 0.61
CIRBP-227ENST00000590188 TBC1D3BA6NDS4 549 aa18.86■□□□□ 0.61
CIRBP-227ENST00000590188 MSI1O43347 362 aaKnown RBP18.86■□□□□ 0.61
CIRBP-227ENST00000590188 EIF2DP41214 584 aaKnown RBP18.86■□□□□ 0.61
CIRBP-227ENST00000590188 GRIA2P42262 883 aa18.86■□□□□ 0.61
CIRBP-227ENST00000590188 SIM2Q14190 667 aaPredicted RBP18.86■□□□□ 0.61
CIRBP-227ENST00000590188 C11orf57Q6ZUT1 292 aaPredicted RBP18.86■□□□□ 0.61
CIRBP-227ENST00000590188 CEP68Q76N32 757 aa18.86■□□□□ 0.61
CIRBP-227ENST00000590188 SYT13Q7L8C5 426 aa18.86■□□□□ 0.61
CIRBP-227ENST00000590188 WDR5BQ86VZ2 330 aa18.86■□□□□ 0.61
CIRBP-227ENST00000590188 PHTF2Q8N3S3 785 aa18.86■□□□□ 0.61
CIRBP-227ENST00000590188 ALLCQ8N6M5 410 aa18.86■□□□□ 0.61
CIRBP-227ENST00000590188 RUBCNQ92622 972 aa18.86■□□□□ 0.61
CIRBP-227ENST00000590188 AGO1Q9UL18 857 aaKnown RBP18.86■□□□□ 0.61
CIRBP-227ENST00000590188 RAB23Q9ULC3 237 aa18.86■□□□□ 0.61
CIRBP-227ENST00000590188 KIAA1549LQ6ZVL6 1849 aa18.86■□□□□ 0.61
CIRBP-227ENST00000590188 GTPBP10A4D1E9 387 aaKnown RBP18.85■□□□□ 0.61
CIRBP-227ENST00000590188 MED7O43513 233 aa18.85■□□□□ 0.61
CIRBP-227ENST00000590188 KLF8O95600 359 aaPredicted RBP18.85■□□□□ 0.61
CIRBP-227ENST00000590188 GPD2P43304 727 aa18.85■□□□□ 0.61
CIRBP-227ENST00000590188 C10orf76Q5T2E6 689 aa18.85■□□□□ 0.61
CIRBP-227ENST00000590188 GRAMD4Q6IC98 578 aa18.85■□□□□ 0.61
CIRBP-227ENST00000590188 SASS6Q6UVJ0 657 aa18.85■□□□□ 0.61
CIRBP-227ENST00000590188 RBM43Q6ZSC3 357 aaKnown RBP18.85■□□□□ 0.61
CIRBP-227ENST00000590188 PASD1Q8IV76 773 aa18.85■□□□□ 0.61
CIRBP-227ENST00000590188 KIAA2013Q8IYS2 634 aa18.85■□□□□ 0.61
CIRBP-227ENST00000590188 TXNDC5Q8NBS9 432 aaKnown RBP18.85■□□□□ 0.61
CIRBP-227ENST00000590188 ZNF606Q8WXB4 792 aa18.85■□□□□ 0.61
CIRBP-227ENST00000590188 P2RY11Q96G91 374 aa18.85■□□□□ 0.61
CIRBP-227ENST00000590188 HSFY1Q96LI6 401 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms