RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 LMAN2Q12907 356 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 C1orf220Q5T0J3 134 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 C10orf76Q5T2E6 689 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 HECTD3Q5T447 861 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 ACOT1Q86TX2 421 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 C12orf56Q8IXR9 622 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 PGBD3Q8N328 593 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 CCDC26Q8TAB7 109 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 SMG1Q96Q15 3661 aaKnown RBP14.96□□□□□ -0.01
SAFB2-205ENST00000590000 TWNKQ96RR1 684 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 GTPBP2Q9BX10 602 aaKnown RBP14.96□□□□□ -0.01
SAFB2-205ENST00000590000 KLF16Q9BXK1 252 aaPredicted RBP14.96□□□□□ -0.01
SAFB2-205ENST00000590000 NUSAP1Q9BXS6 441 aaKnown RBP14.96□□□□□ -0.01
SAFB2-205ENST00000590000 VRTNQ9H8Y1 702 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 CGNQ9P2M7 1197 aaKnown RBP14.96□□□□□ -0.01
SAFB2-205ENST00000590000 NUDT5Q9UKK9 219 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 MSRB2Q9Y3D2 182 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 STARD13Q9Y3M8 1113 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 NEUROG3Q9Y4Z2 214 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 PTPRBP23467 1997 aa14.96□□□□□ -0.01
SAFB2-205ENST00000590000 ADAMTS20P59510 1910 aa14.96□□□□□ -0.02
SAFB2-205ENST00000590000 UPK3BL1B0FP48 263 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 UPK3BL2E5RIL1 263 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 CALUO43852 315 aaPredicted RBP14.95□□□□□ -0.02
SAFB2-205ENST00000590000 HOXB2P14652 356 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 MAOBP27338 520 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 TNNC1P63316 161 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 ZNF33AQ06730 810 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 CEP135Q66GS9 1140 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 SPOPLQ6IQ16 392 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 MINDY1Q8N5J2 469 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 C12orf29Q8N999 325 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 GOLGA5Q8TBA6 731 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 PARD3BQ8TEW8 1205 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 IPO4Q8TEX9 1081 aaKnown RBP14.95□□□□□ -0.02
SAFB2-205ENST00000590000 OVCA2Q8WZ82 227 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 CCDC34Q96HJ3 373 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 SPACA7Q96KW9 195 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 TIGD1Q96MW7 591 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 DUSP9Q99956 384 aaKnown RBP14.95□□□□□ -0.02
SAFB2-205ENST00000590000 KRT82Q9NSB4 513 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 TBC1D14Q9P2M4 693 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 DEC1Q9P2X7 70 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 SLC6A14Q9UN76 642 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 CYP8B1Q9UNU6 501 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 R3HCC1Q9Y3T6 440 aaKnown RBP14.95□□□□□ -0.02
SAFB2-205ENST00000590000 SLCO1B1Q9Y6L6 691 aa14.95□□□□□ -0.02
SAFB2-205ENST00000590000 FAM221BA6H8Z2 402 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 CACNG3O60359 315 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 RTN3O95197 1032 aaPredicted RBP14.94□□□□□ -0.02
SAFB2-205ENST00000590000 SERPINF2P08697 491 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 NTSR1P30989 418 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 CLDN10P78369 228 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 BNC1Q01954 994 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 DUOXA1Q1HG43 343 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 ANO4Q32M45 955 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 SPDYCQ5MJ68 293 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 HTR3DQ70Z44 454 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 RAB44Q7Z6P3 723 aaPredicted RBP14.94□□□□□ -0.02
SAFB2-205ENST00000590000 TRIML1Q8N9V2 468 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 SMARCE1Q969G3 411 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 HSPA12BQ96MM6 686 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 GABRG3Q99928 467 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 CSNK1G1Q9HCP0 422 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 DMAP1Q9NPF5 467 aaPredicted RBP14.94□□□□□ -0.02
SAFB2-205ENST00000590000 CACNA2D2Q9NY47 1150 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 TRAF3IP3Q9Y228 551 aa14.94□□□□□ -0.02
SAFB2-205ENST00000590000 CKAP5Q14008 2032 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 ACACAQ13085 2346 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.93□□□□□ -0.02
SAFB2-205ENST00000590000 CYP26A1O43174 497 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 SH3BP5O60239 455 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 TLR5O60602 858 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 AP1G2O75843 785 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 KIF20AO95235 890 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 SMC2O95347 1197 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 KLKB1P03952 638 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 PRCPP42785 496 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 TUBP50607 506 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 MAP3K7CLP57077 242 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 ADAM9Q13443 819 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 Q6ZNB5 142 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 TPGS1Q6ZTW0 290 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 SCD5Q86SK9 330 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 DDX42Q86XP3 938 aaKnown RBP eCLIP14.93□□□□□ -0.02
SAFB2-205ENST00000590000 SLC9A9Q8IVB4 645 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 GUF1Q8N442 669 aaKnown RBP14.93□□□□□ -0.02
SAFB2-205ENST00000590000 PDZD8Q8NEN9 1154 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 SLC2A14Q8TDB8 520 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 OTUB2Q96DC9 234 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 EEF2KMTQ96G04 330 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 MRGPRX1Q96LB2 322 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.93□□□□□ -0.02
SAFB2-205ENST00000590000 FAM49BQ9NUQ9 324 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 DNAJC17Q9NVM6 304 aaKnown RBP14.93□□□□□ -0.02
SAFB2-205ENST00000590000 PLK2Q9NYY3 685 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 EHD2Q9NZN4 543 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 MARK1Q9P0L2 795 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 CLEC4EQ9ULY5 219 aa14.93□□□□□ -0.02
SAFB2-205ENST00000590000 SH3BP1Q9Y3L3 701 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms