RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 ZC3H10Q96K80 434 aaKnown RBP13.33□□□□□ -0.28
RFX1-207ENST00000589937 CNOT6LQ96LI5 555 aaKnown RBP13.33□□□□□ -0.28
RFX1-207ENST00000589937 GSDMAQ96QA5 445 aa13.33□□□□□ -0.28
RFX1-207ENST00000589937 TSG101Q99816 390 aa13.33□□□□□ -0.28
RFX1-207ENST00000589937 DUSP9Q99956 384 aaKnown RBP13.33□□□□□ -0.28
RFX1-207ENST00000589937 BBS2Q9BXC9 721 aa13.33□□□□□ -0.28
RFX1-207ENST00000589937 PNPLA8Q9NP80 782 aa13.33□□□□□ -0.28
RFX1-207ENST00000589937 CD93Q9NPY3 652 aa13.33□□□□□ -0.28
RFX1-207ENST00000589937 RASAL2Q9UJF2 1139 aa13.33□□□□□ -0.28
RFX1-207ENST00000589937 CTNND2Q9UQB3 1225 aa13.33□□□□□ -0.28
RFX1-207ENST00000589937 USP3Q9Y6I4 520 aa13.33□□□□□ -0.28
RFX1-207ENST00000589937 MAP1BP46821 2468 aaKnown RBP13.33□□□□□ -0.28
RFX1-207ENST00000589937 ASCC3Q8N3C0 2202 aaKnown RBP13.32□□□□□ -0.28
RFX1-207ENST00000589937 TCRBV21S2A2A0A5A6 115 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 PATE3B3GLJ2 98 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 SMC2O95347 1197 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 TYRP14679 529 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 MRPS21P82921 87 aaKnown RBP13.32□□□□□ -0.28
RFX1-207ENST00000589937 EFEMP1Q12805 493 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 CUL2Q13617 745 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 PPM1JQ5JR12 505 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 PMS2CLQ68D20 193 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 ARMCX6Q7L4S7 300 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 ZNF513Q8N8E2 541 aaPredicted RBP13.32□□□□□ -0.28
RFX1-207ENST00000589937 C12orf50Q8NA57 414 aaPredicted RBP13.32□□□□□ -0.28
RFX1-207ENST00000589937 OTUB2Q96DC9 234 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 RTKNQ9BST9 563 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 ULBP1Q9BZM6 244 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 SLC6A17Q9H1V8 727 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 DEC1Q9P2X7 70 aa13.32□□□□□ -0.28
RFX1-207ENST00000589937 MBD1Q9UIS9 605 aaPredicted RBP13.32□□□□□ -0.28
RFX1-207ENST00000589937 ATXN2Q99700 1313 aaKnown RBP13.32□□□□□ -0.28
RFX1-207ENST00000589937 PCDH15Q96QU1 1955 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 ACACBO00763 2458 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 TBC1D3BA6NDS4 549 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.31□□□□□ -0.28
RFX1-207ENST00000589937 PRRT4C9JH25 899 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 CACNG3O60359 315 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 ZNF806P0C7X5 589 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 FMO5P49326 533 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 STX17P56962 302 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 NUCB2P80303 420 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 FKBP3Q00688 224 aaKnown RBP13.31□□□□□ -0.28
RFX1-207ENST00000589937 LRRC63Q05C16 580 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 PDE4CQ08493 712 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 ELF2Q15723 593 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 RAB41Q5JT25 222 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 BTBD8Q5XKL5 378 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 ARHGAP17Q68EM7 881 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 GRAMD4Q6IC98 578 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 KIAA1211LQ6NV74 962 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 TTI2Q6NXR4 508 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 OLIG1Q8TAK6 271 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 UBA3Q8TBC4 463 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 TFAP2BQ92481 460 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 LOXL4Q96JB6 756 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 ZSWIM1Q9BR11 485 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 BCCIPQ9P287 314 aaKnown RBP eCLIP13.31□□□□□ -0.28
RFX1-207ENST00000589937 ARMCX3Q9UH62 379 aaPredicted RBP13.31□□□□□ -0.28
RFX1-207ENST00000589937 DNMT3LQ9UJW3 386 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 LSM7Q9UK45 103 aaKnown RBP13.31□□□□□ -0.28
RFX1-207ENST00000589937 TSPAN16Q9UKR8 245 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 COQ4Q9Y3A0 265 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 RAD54BQ9Y620 910 aa13.31□□□□□ -0.28
RFX1-207ENST00000589937 TP53BP1Q12888 1972 aaPredicted RBP13.31□□□□□ -0.28
RFX1-207ENST00000589937 FRYQ5TBA9 3013 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 NUMA1Q14980 2115 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 A0A0A0MRY4 1105 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 BCLAF3A2AJT9 711 aaKnown RBP13.3□□□□□ -0.28
RFX1-207ENST00000589937 PIK3R2O00459 728 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 STX10O60499 249 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 GABBR2O75899 941 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 CD19P15391 556 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 GABRG2P18507 467 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 TRIM21P19474 475 aaKnown RBP13.3□□□□□ -0.28
RFX1-207ENST00000589937 CORO1AP31146 461 aaKnown RBP13.3□□□□□ -0.28
RFX1-207ENST00000589937 TNFRSF4P43489 277 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 TKTL1P51854 596 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 YWHAGP61981 247 aaKnown RBP eCLIP13.3□□□□□ -0.28
RFX1-207ENST00000589937 ADIGQ0VDE8 80 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 ARHGEF19Q8IW93 802 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 ANKRD52Q8NB46 1076 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 NELFBQ8WX92 580 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 CCDC34Q96HJ3 373 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 TIGD1Q96MW7 591 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 CD248Q9HCU0 757 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 CACNA2D2Q9NY47 1150 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 MARK1Q9P0L2 795 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 CLEC4EQ9ULY5 219 aa13.3□□□□□ -0.28
RFX1-207ENST00000589937 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.29□□□□□ -0.28
RFX1-207ENST00000589937 A0A1W2PQF6 199 aa13.29□□□□□ -0.28
RFX1-207ENST00000589937 LNP1A1A4G5 178 aa13.29□□□□□ -0.28
RFX1-207ENST00000589937 PPP1R3GB7ZBB8 358 aa13.29□□□□□ -0.28
RFX1-207ENST00000589937 WASH3PC4AMC7 463 aa13.29□□□□□ -0.28
RFX1-207ENST00000589937 RNF225M0QZC1 329 aaPredicted RBP13.29□□□□□ -0.28
RFX1-207ENST00000589937 O00370 1275 aa13.29□□□□□ -0.28
RFX1-207ENST00000589937 PSMA7O14818 248 aa13.29□□□□□ -0.28
RFX1-207ENST00000589937 MSI1O43347 362 aaKnown RBP13.29□□□□□ -0.28
RFX1-207ENST00000589937 CAVIN2O95810 425 aa13.29□□□□□ -0.28
RFX1-207ENST00000589937 HOXB2P14652 356 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms