RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 YWHAGP61981 247 aaKnown RBP eCLIP10.15□□□□□ -0.78
APOC1-204ENST00000589078 SPEM2Q0P670 501 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 USP4Q13107 963 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 ZNF77Q15935 545 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 LPAL2Q16609 132 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 PKDCCQ504Y2 493 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 RAB41Q5JT25 222 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 C10orf120Q5SQS8 335 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 ZNF852Q6ZMS4 543 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 CACNA2D4Q7Z3S7 1137 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 LUZP1Q86V48 1076 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 CPA6Q8N4T0 437 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 STK32AQ8WU08 396 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 SLC35F5Q8WV83 523 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 OSCP1Q8WVF1 389 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 IRGQQ8WZA9 623 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 ATP2A3Q93084 1043 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 RSPRY1Q96DX4 576 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 SLC22A12Q96S37 553 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 NAA15Q9BXJ9 866 aaKnown RBP10.15□□□□□ -0.78
APOC1-204ENST00000589078 OSBPL6Q9BZF3 934 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 ULBP1Q9BZM6 244 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 C8orf33Q9H7E9 229 aaPredicted RBP10.15□□□□□ -0.78
APOC1-204ENST00000589078 CCSER2Q9H7U1 834 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 PRMT8Q9NR22 394 aaPredicted RBP10.15□□□□□ -0.78
APOC1-204ENST00000589078 ST7Q9NRC1 585 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 DUS2Q9NX74 493 aaKnown RBP10.15□□□□□ -0.78
APOC1-204ENST00000589078 SMPD4Q9NXE4 827 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 SIK3Q9Y2K2 1263 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 SH3BP1Q9Y3L3 701 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.15□□□□□ -0.78
APOC1-204ENST00000589078 ZFYVE26Q68DK2 2539 aa10.15□□□□□ -0.78
APOC1-204ENST00000589078 TULP2O00295 520 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 NCAM2O15394 837 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 NFATC1O95644 943 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 KCNA4P22459 653 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 NR1H3Q13133 447 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 ITPRIPL2Q3MIP1 535 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 BTBD8Q5XKL5 378 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 PM20D1Q6GTS8 502 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 DPY19L2P1Q6NXN4 242 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 PMF1Q6P1K2 205 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 DENND1BQ6P3S1 775 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 LRSAM1Q6UWE0 723 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 TPRG1Q6ZUI0 275 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 APTXQ7Z2E3 356 aaKnown RBP10.14□□□□□ -0.79
APOC1-204ENST00000589078 SLC47A2Q86VL8 602 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 SCML4Q8N228 414 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 ZNF276Q8N554 614 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 MSANTD4Q8NCY6 345 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 NETO1Q8TDF5 533 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 IPO4Q8TEX9 1081 aaKnown RBP10.14□□□□□ -0.79
APOC1-204ENST00000589078 RNF139Q8WU17 664 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 LRRC3BQ96PB8 259 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 NELL2Q99435 816 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 ZSWIM1Q9BR11 485 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 MIS12Q9H081 205 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 RNF38Q9H0F5 515 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 GANQ9H2C0 597 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 LHX5Q9H2C1 402 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 SYNCQ9H7C4 482 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 RTN4Q9NQC3 1192 aaKnown RBP10.14□□□□□ -0.79
APOC1-204ENST00000589078 GKN1Q9NS71 199 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 OLA1Q9NTK5 396 aaKnown RBP10.14□□□□□ -0.79
APOC1-204ENST00000589078 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.14□□□□□ -0.79
APOC1-204ENST00000589078 CFAP97Q9P2B7 532 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 TBC1D14Q9P2M4 693 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 LSM7Q9UK45 103 aaKnown RBP10.14□□□□□ -0.79
APOC1-204ENST00000589078 AJAP1Q9UKB5 411 aaPredicted RBP10.14□□□□□ -0.79
APOC1-204ENST00000589078 PCDHGC3Q9UN70 934 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 PIAS3Q9Y6X2 628 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 NOTCH4Q99466 2003 aa10.14□□□□□ -0.79
APOC1-204ENST00000589078 A0A1B0GTH6 734 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.13□□□□□ -0.79
APOC1-204ENST00000589078 A0A1W2PQC6 194 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 E2F8A0AVK6 867 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 ARNTLO00327 626 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 SLC30A4O14863 429 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 LSM8O95777 96 aaKnown RBP10.13□□□□□ -0.79
APOC1-204ENST00000589078 CALCAP01258 141 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 PNMA6AP0CW24 399 aaPredicted RBP10.13□□□□□ -0.79
APOC1-204ENST00000589078 CYP11B1P15538 503 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 CLCN1P35523 988 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 SOX5P35711 763 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 GPD2P43304 727 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 RPS9P46781 194 aaKnown RBP10.13□□□□□ -0.79
APOC1-204ENST00000589078 KLK7P49862 253 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 UBASH3AP57075 661 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 COG7P83436 770 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 MTAPQ13126 283 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 PDCLQ13371 301 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 RUNX3Q13761 415 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 SCD5Q86SK9 330 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 RALGPS2Q86X27 583 aaPredicted RBP10.13□□□□□ -0.79
APOC1-204ENST00000589078 ZNF677Q86XU0 584 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 PASD1Q8IV76 773 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 TMEM35BQ8NCS4 154 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 CLDN23Q96B33 292 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 OTUB2Q96DC9 234 aa10.13□□□□□ -0.79
APOC1-204ENST00000589078 ZFYVE19Q96K21 471 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms