RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 TRIM24O15164 1050 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 THAP12O43422 761 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 APODP05090 189 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 SETSIPP0DME0 302 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 TIE1P35590 1138 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 MFAP3P55082 362 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 GCNT1Q02742 428 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 GAD2Q05329 585 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 MESP2Q0VG99 397 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 CNGA2Q16280 664 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 EXOC3L4Q17RC7 722 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 GAB4Q2WGN9 574 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 VWA3BQ502W6 1294 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 RAB41Q5JT25 222 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 EMC10Q5UCC4 262 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 BSPRYQ5W0U4 402 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 PMF1Q6P1K2 205 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 DENND1BQ6P3S1 775 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 TRIM65Q6PJ69 517 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 HTR3DQ70Z44 454 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 FAM114A1Q8IWE2 563 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 ZBTB44Q8NCP5 570 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 RNF139Q8WU17 664 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 ERLEC1Q96DZ1 483 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 TUBGCP2Q9BSJ2 902 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 BBS2Q9BXC9 721 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 SPHK2Q9NRA0 654 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 SAMSN1Q9NSI8 373 aaKnown RBP9.28□□□□□ -0.92
SDF2-207ENST00000588472 PLK2Q9NYY3 685 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 CLIC5Q9NZA1 410 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 MARCH2Q9P0N8 246 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 DEC1Q9P2X7 70 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 SFMBT1Q9UHJ3 866 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 RAB23Q9ULC3 237 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 STRIP2Q9ULQ0 834 aa9.28□□□□□ -0.92
SDF2-207ENST00000588472 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.28□□□□□ -0.92
SDF2-207ENST00000588472 GVINP1Q7Z2Y8 2422 aa9.27□□□□□ -0.92
SDF2-207ENST00000588472 DMXL1Q9Y485 3027 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 FAM170AA1A519 330 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 TBC1D3BA6NDS4 549 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 KCNJ18B7U540 433 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 K7ESF4 209 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 HRO43593 1189 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 STC2O76061 302 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 KAT7O95251 611 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 KLKB1P03952 638 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 TDGF1P13385 188 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 TYRP14679 529 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 PON1P27169 355 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 ERCC5P28715 1186 aaPredicted RBP9.27□□□□□ -0.93
SDF2-207ENST00000588472 CORO1AP31146 461 aaKnown RBP9.27□□□□□ -0.93
SDF2-207ENST00000588472 ZNF132P52740 706 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 COG7P83436 770 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 SIM2Q14190 667 aaPredicted RBP9.27□□□□□ -0.93
SDF2-207ENST00000588472 KCNJ12Q14500 433 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 DMC1Q14565 340 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 MAN2A1Q16706 1144 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 FBXO43Q4G163 708 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 PM20D1Q6GTS8 502 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 SASS6Q6UVJ0 657 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 MAMSTRQ6ZN01 415 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 CEP68Q76N32 757 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 LONP2Q86WA8 852 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 DENND1CQ8IV53 801 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 FMNL3Q8IVF7 1028 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 SCUBE3Q8IX30 993 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 SUMF1Q8NBK3 374 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 CLEC4CQ8WTT0 213 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 SLC35F5Q8WV83 523 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 OTUB2Q96DC9 234 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 CDK5RAP1Q96SZ6 601 aaKnown RBP9.27□□□□□ -0.93
SDF2-207ENST00000588472 FAM126AQ9BYI3 521 aaPredicted RBP9.27□□□□□ -0.93
SDF2-207ENST00000588472 NDST4Q9H3R1 872 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 DNAJC17Q9NVM6 304 aaKnown RBP9.27□□□□□ -0.93
SDF2-207ENST00000588472 TAB2Q9NYJ8 693 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 APEX2Q9UBZ4 518 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 AJAP1Q9UKB5 411 aaPredicted RBP9.27□□□□□ -0.93
SDF2-207ENST00000588472 CDV3Q9UKY7 258 aaKnown RBP9.27□□□□□ -0.93
SDF2-207ENST00000588472 SMG5Q9UPR3 1016 aaKnown RBP9.27□□□□□ -0.93
SDF2-207ENST00000588472 INVSQ9Y283 1065 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 NFE2L3Q9Y4A8 694 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 MYOFQ9NZM1 2061 aa9.27□□□□□ -0.93
SDF2-207ENST00000588472 PRR5-ARHGAP8B1AHC4 643 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.26□□□□□ -0.93
SDF2-207ENST00000588472 MED7O43513 233 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 GREM1O60565 184 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 TSPAN3O60637 253 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 TULP3O75386 442 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 GABBR2O75899 941 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 KLF8O95600 359 aaPredicted RBP9.26□□□□□ -0.93
SDF2-207ENST00000588472 PNMA6AP0CW24 399 aaPredicted RBP9.26□□□□□ -0.93
SDF2-207ENST00000588472 GNA15P30679 374 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 GRIA2P42262 883 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 WASP42768 502 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 ATXN1P54253 815 aaKnown RBP9.26□□□□□ -0.93
SDF2-207ENST00000588472 DAOAP59103 153 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 ARHGAP8P85298 464 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 LMNB2Q03252 620 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 RAPGEF1Q13905 1077 aa9.26□□□□□ -0.93
SDF2-207ENST00000588472 STILQ15468 1287 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms