RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 CDH8P55286 799 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 USP46P62068 366 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 MRPS21P82921 87 aaKnown RBP16.58■□□□□ 0.24
NCLN-203ENST00000587740 LMAN2Q12907 356 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 SEMA3BQ13214 749 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 MAP7D1Q3KQU3 841 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 TCP11X2Q5H9J9 407 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 EMC10Q5UCC4 262 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 LPCAT2Q7L5N7 544 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 SYT12Q8IV01 421 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 ADGRG2Q8IZP9 1017 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 ALLCQ8N6M5 410 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 AOPEPQ8N6M6 819 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 TXNDC5Q8NBS9 432 aaKnown RBP16.58■□□□□ 0.24
NCLN-203ENST00000587740 FAXDC2Q96IV6 333 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 BPIFA3Q9BQP9 254 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 SMYD3Q9H7B4 428 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 FANCLQ9NW38 375 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 CDH9Q9ULB4 789 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 LOC400499M0QZD8 3231 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 ATXN2Q99700 1313 aaKnown RBP16.57■□□□□ 0.24
NCLN-203ENST00000587740 SMTNL1A8MU46 457 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 A8MXQ7 604 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 LEFTY2O00292 366 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 ATP2C2O75185 946 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 KLF8O95600 359 aaPredicted RBP16.57■□□□□ 0.24
NCLN-203ENST00000587740 TPM2P07951 284 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 PDGFRBP09619 1106 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 LMO2P25791 158 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 ZNF165P49910 485 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 FAM193AP78312 1265 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 FAM171BQ6P995 826 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 SLC23A3Q6PIS1 610 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 C12orf40Q86WS4 652 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 SPATA2LQ8IUW3 424 aaPredicted RBP16.57■□□□□ 0.24
NCLN-203ENST00000587740 ANKRD20A12PQ8NF67 263 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 FUBP3Q96I24 572 aaKnown RBP eCLIP16.57■□□□□ 0.24
NCLN-203ENST00000587740 SYT15Q9BQS2 421 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 TUBGCP2Q9BSJ2 902 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 NUSAP1Q9BXS6 441 aaKnown RBP16.57■□□□□ 0.24
NCLN-203ENST00000587740 NIF3L1Q9GZT8 377 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 RNF38Q9H0F5 515 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 SLC32A1Q9H598 525 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 CYP3A43Q9HB55 503 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 ZDHHC4Q9NPG8 344 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 CEP192Q8TEP8 1941 aa16.57■□□□□ 0.24
NCLN-203ENST00000587740 BECN2A8MW95 431 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 UPK3BL1B0FP48 263 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 UPK3BL2E5RIL1 263 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 PES1O00541 588 aaKnown RBP16.56■□□□□ 0.24
NCLN-203ENST00000587740 SCAMP3O14828 347 aaKnown RBP16.56■□□□□ 0.24
NCLN-203ENST00000587740 ADAM23O75077 832 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 CDK11BP21127 795 aaKnown RBP16.56■□□□□ 0.24
NCLN-203ENST00000587740 ITPKAP23677 461 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 TIE1P35590 1138 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 MAGEA11P43364 429 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 KIR2DL1P43626 348 aaPredicted RBP16.56■□□□□ 0.24
NCLN-203ENST00000587740 ASPAP45381 313 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 SIM1P81133 766 aaPredicted RBP16.56■□□□□ 0.24
NCLN-203ENST00000587740 DHCR24Q15392 516 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 VWA3BQ502W6 1294 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 CDKAL1Q5VV42 579 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 PEAR1Q5VY43 1037 aaPredicted RBP16.56■□□□□ 0.24
NCLN-203ENST00000587740 EHBP1Q8NDI1 1231 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 TATDN2Q93075 761 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 NT5C1BQ96P26 610 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 SDCBP2Q9H190 292 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 NDST4Q9H3R1 872 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 PILRBQ9UKJ0 227 aa16.56■□□□□ 0.24
NCLN-203ENST00000587740 A0A0A0MRY4 1105 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 MAP3K13O43283 966 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 ALDH1A2O94788 518 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 KAT7O95251 611 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 TRIM21P19474 475 aaKnown RBP16.55■□□□□ 0.24
NCLN-203ENST00000587740 LRMPQ12912 555 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 NCAPHQ15003 741 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 MAPRE1Q15691 268 aaKnown RBP16.55■□□□□ 0.24
NCLN-203ENST00000587740 RHBDF2Q6PJF5 856 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 CHCHD4Q8N4Q1 142 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 TTC39CQ8N584 583 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 WHAMMQ8TF30 809 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 HMGB4Q8WW32 186 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 SPATA17Q96L03 361 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 PNKPQ96T60 521 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 DNAI2Q9GZS0 605 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 CRTAC1Q9NQ79 661 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 PCDH15Q96QU1 1955 aa16.55■□□□□ 0.24
NCLN-203ENST00000587740 FAM221BA6H8Z2 402 aa16.54■□□□□ 0.24
NCLN-203ENST00000587740 OLFM2O95897 454 aa16.54■□□□□ 0.24
NCLN-203ENST00000587740 CD58P19256 250 aa16.54■□□□□ 0.24
NCLN-203ENST00000587740 BDNFP23560 247 aa16.54■□□□□ 0.24
NCLN-203ENST00000587740 TBXAS1P24557 533 aaPredicted RBP16.54■□□□□ 0.24
NCLN-203ENST00000587740 NDST1P52848 882 aa16.54■□□□□ 0.24
NCLN-203ENST00000587740 PSMC1P62191 440 aaKnown RBP16.54■□□□□ 0.24
NCLN-203ENST00000587740 YWHAEP62258 255 aaKnown RBP16.54■□□□□ 0.24
NCLN-203ENST00000587740 SLC7A9P82251 487 aa16.54■□□□□ 0.24
NCLN-203ENST00000587740 MIIPQ5JXC2 388 aa16.54■□□□□ 0.24
NCLN-203ENST00000587740 SPDYCQ5MJ68 293 aa16.54■□□□□ 0.24
NCLN-203ENST00000587740 LYSMD4Q5XG99 296 aa16.54■□□□□ 0.24
NCLN-203ENST00000587740 GBP6Q6ZN66 633 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms