RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 SCFD1Q8WVM8 642 aa10.27□□□□□ -0.77
CDK5RAP3-227ENST00000583352 HMGB4Q8WW32 186 aa10.27□□□□□ -0.77
CDK5RAP3-227ENST00000583352 RLN3Q8WXF3 142 aa10.27□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MED10Q9BTT4 135 aa10.27□□□□□ -0.77
CDK5RAP3-227ENST00000583352 NUSAP1Q9BXS6 441 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-227ENST00000583352 B3GNT5Q9BYG0 378 aa10.27□□□□□ -0.77
CDK5RAP3-227ENST00000583352 VPS16Q9H269 839 aa10.27□□□□□ -0.77
CDK5RAP3-227ENST00000583352 KCTD10Q9H3F6 313 aa10.27□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TMEM30AQ9NV96 361 aa10.27□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TAB2Q9NYJ8 693 aa10.27□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SH3BP1Q9Y3L3 701 aa10.27□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CNOT1A5YKK6 2376 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MAP1BP46821 2468 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TCRBV21S2A2A0A5A6 115 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CDX4O14627 284 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 COCHO43405 550 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SKILP12757 684 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 KIR2DL1P43626 348 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 LRRC63Q05C16 580 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MESP2Q0VG99 397 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 BMT2Q1RMZ1 405 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SPDYCQ5MJ68 293 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 LY6G5CQ5SRR4 150 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 EMC10Q5UCC4 262 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 UNQ6494/PRO21346Q6UXR6 183 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 NUDT18Q6ZVK8 323 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TRMT11Q7Z4G4 463 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 FAM35AQ86V20 835 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SYT12Q8IV01 421 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SFTPA1Q8IWL2 248 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TMEFF1Q8IYR6 380 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 C17orf53Q8N3J3 647 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TNIP3Q96KP6 325 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 NACA2Q9H009 215 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 DMAP1Q9NPF5 467 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 KCND1Q9NSA2 647 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CGNQ9P2M7 1197 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CHORDC1Q9UHD1 332 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ITIH6Q6UXX5 1313 aa10.26□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TBC1D3BA6NDS4 549 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 LGALS16A8MUM7 142 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 C1QTNF9BB2RNN3 333 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 HOXC11O43248 304 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 EXOC3O60645 756 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ADAM23O75077 832 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 FGFR1OPO95684 399 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 C1QTNF9P0C862 333 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CHRM1P11229 460 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 PTGER3P43115 390 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TUBP50607 506 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 AP3M2P53677 418 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SLC5A3P53794 718 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 BIRC3Q13489 604 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ANO4Q32M45 955 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ZNF699Q32M78 642 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MAP7D1Q3KQU3 841 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ZNF667Q5HYK9 610 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SNX30Q5VWJ9 437 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 LYSMD4Q5XG99 296 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 FAM114A1Q8IWE2 563 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 C12orf56Q8IXR9 622 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 PHTF2Q8N3S3 785 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ZNF513Q8N8E2 541 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 NAT16Q8N8M0 369 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TC2NQ8N9U0 490 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 DEFB124Q8NES8 71 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ANKRD20A12PQ8NF67 263 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 KCNV2Q8TDN2 545 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ZNF516Q92618 1163 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SMARCD1Q96GM5 515 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 KCNK16Q96T55 309 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 XYLT2Q9H1B5 865 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SLC32A1Q9H598 525 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 SMYD3Q9H7B4 428 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 VRTNQ9H8Y1 702 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ZDHHC4Q9NPG8 344 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 COMMD8Q9NX08 183 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 DEC1Q9P2X7 70 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MBD1Q9UIS9 605 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 EPG5Q9HCE0 2579 aa10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 KMT2BQ9UMN6 2715 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MYOFQ9NZM1 2061 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 A0A1W2PQC6 194 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 RNF225M0QZC1 329 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ZBTB24O43167 697 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 TULP3O75386 442 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 AP1G2O75843 785 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 KIF20AO95235 890 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ZDHHC11BP0C7U3 371 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 ENGP17813 658 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 HOXD12P35452 270 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MAPK8P45983 427 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 CDH8P55286 799 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 FKBP3Q00688 224 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 GOLGA8FQ08AF8 430 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 GOLGA8DPQ0D2H9 430 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 KNOP1Q1ED39 458 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 MIIPQ5JXC2 388 aa10.24□□□□□ -0.77
CDK5RAP3-227ENST00000583352 C10orf76Q5T2E6 689 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms