RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 TAS2R40P59535 323 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 LONRF2Q1L5Z9 754 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 FAM171BQ6P995 826 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 SPATA31D4Q6ZUB0 917 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 CEP57Q86XR8 500 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 SUGP1Q8IWZ8 645 aaKnown RBP13.16□□□□□ -0.3
SRSF1-204ENST00000581979 NIPA2Q8N8Q9 360 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 SMARCD1Q96GM5 515 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 TMEM209Q96SK2 561 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 NAP1L3Q99457 506 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-204ENST00000581979 LRRC4Q9HBW1 653 aa13.16□□□□□ -0.3
SRSF1-204ENST00000581979 VWA8A3KMH1 1905 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 GRAP2O75791 330 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 GABBR2O75899 941 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 RHOXF2BP0C7M4 288 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 PYGMP11217 842 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 DESP17661 470 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 PSMD5Q16401 504 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 ZFYVE27Q5T4F4 411 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 CCDC70Q6NSX1 233 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 AADACL2Q6P093 401 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 MMGT1Q8N4V1 131 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 GPR161Q8N6U8 529 aaKnown RBP13.15□□□□□ -0.3
SRSF1-204ENST00000581979 CLEC4CQ8WTT0 213 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 RXFP2Q8WXD0 754 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 KCTD13Q8WZ19 329 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 SMG7Q92540 1137 aaKnown RBP13.15□□□□□ -0.3
SRSF1-204ENST00000581979 PIWIL1Q96J94 861 aaKnown RBP13.15□□□□□ -0.3
SRSF1-204ENST00000581979 RHOXF2Q9BQY4 288 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 PRKD2Q9BZL6 878 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 EPC1Q9H2F5 836 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 RBM12Q9NTZ6 932 aaKnown RBP13.15□□□□□ -0.3
SRSF1-204ENST00000581979 ASNSD1Q9NWL6 643 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 TMEM59LQ9UK28 342 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 FBXW11Q9UKB1 542 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 TTC7AQ9ULT0 858 aaPredicted RBP13.15□□□□□ -0.3
SRSF1-204ENST00000581979 PIEZO1Q92508 2521 aa13.15□□□□□ -0.3
SRSF1-204ENST00000581979 CLUHO75153 1309 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 KRIT1O00522 736 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 ZMYND10O75800 440 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 RNF8O76064 485 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 OAZ2O95190 189 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 PDGFRAP16234 1089 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 ZNF143P52747 638 aaPredicted RBP13.14□□□□□ -0.31
SRSF1-204ENST00000581979 ADIGQ0VDE8 80 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 HADHQ16836 314 aaKnown RBP13.14□□□□□ -0.31
SRSF1-204ENST00000581979 ODF2Q5BJF6 829 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 VARS2Q5ST30 1063 aaKnown RBP13.14□□□□□ -0.31
SRSF1-204ENST00000581979 C4orf50Q6ZRC1 276 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 SPATA2LQ8IUW3 424 aaPredicted RBP13.14□□□□□ -0.31
SRSF1-204ENST00000581979 DCP1BQ8IZD4 617 aaKnown RBP13.14□□□□□ -0.31
SRSF1-204ENST00000581979 SIX6OS1Q8N1H7 587 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 PKMYT1Q99640 499 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 SMOQ99835 787 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 AP1M1Q9BXS5 423 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 TMLHEQ9NVH6 421 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 PTPRDP23468 1912 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 KMT2EQ8IZD2 1858 aa13.14□□□□□ -0.31
SRSF1-204ENST00000581979 GOLGA6L10A0A0M3HER8 536 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 C2CD4BA6NLJ0 364 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 BDNFP23560 247 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 FLT3P36888 993 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 SCNN1AP37088 669 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 RAB33AQ14088 237 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 ACAP1Q15027 740 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 TAF5Q15542 800 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 CTXN3Q4LDR2 81 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 SLC39A12Q504Y0 691 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 EFHC1Q5JVL4 640 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 IER5LQ5T953 404 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 LRRTM3Q86VH5 581 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 CCDC50Q8IVM0 306 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 KATNAL2Q8IYT4 538 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 KCNK16Q96T55 309 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 PRRX2Q99811 253 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 CNPY3Q9BT09 278 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 ZCWPW1Q9H0M4 648 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 SMOC2Q9H3U7 446 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 KCNK12Q9HB15 430 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 IGSF9Q9P2J2 1179 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 EPS15L1Q9UBC2 864 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 MTRRQ9UBK8 725 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 DOCK8Q8NF50 2099 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 CCDC188H7C350 402 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 DPYSL4O14531 572 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 ADAM12O43184 909 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 OR4Q2P0C623 313 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 TCF4P15884 667 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 HOXA9P31269 272 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 SDC4P31431 198 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 TKTL1P51854 596 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 CACNA2D1P54289 1103 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 NHLH1Q02575 133 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 TDGQ13569 410 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 CDO1Q16878 200 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 LRRC38Q5VT99 294 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 ZNF280DQ6N043 979 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 TRNP1Q6NT89 227 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 C8orf74Q6P047 294 aa13.13□□□□□ -0.31
SRSF1-204ENST00000581979 SLC26A9Q7LBE3 791 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms