RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ATAD3AQ9NVI7 634 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 SHOC2Q9UQ13 582 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 MGAT5Q09328 741 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 BMPR2Q13873 1038 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 SLC9A5Q14940 896 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 TRIQKQ629K1 86 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 ZNF34Q8IZ26 560 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 TMC2Q8TDI7 906 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 ZNF512Q96ME7 567 aaPredicted RBP14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 BDH2Q9BUT1 245 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 TARS2Q9BW92 718 aaKnown RBP14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 DDX18Q9NVP1 670 aaKnown RBP14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 ETAA1Q9NY74 926 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 C6orf203Q9P0P8 240 aaPredicted RBP14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 NEXMIFQ5QGS0 1516 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 RPS6KA5O75582 802 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 FAM153BP0C7A2 387 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 CSE1LP55060 971 aaKnown RBP14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 TMEM62Q0P6H9 643 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 CDC16Q13042 620 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 FAM153CQ494X1 144 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 FAM180AQ6UWF9 173 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 ATG16L2Q8NAA4 619 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 ZKSCAN4Q969J2 545 aaPredicted RBP14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 OMA1Q96E52 524 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 ACOT9Q9Y305 439 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 MAGEB16A2A368 324 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 PRKAA1Q13131 559 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 PDZK1Q5T2W1 519 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 TCP10LQ8TDR4 215 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 FAM120BQ96EK7 910 aaKnown RBP14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 SERHL2Q9H4I8 314 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 SERHLQ9NQF3 203 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 GPATCH2LQ9NWQ4 482 aa14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
CSNK1D-217ENST00000581241 PSMG1O95456 288 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 ATP4AP20648 1035 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 CASP4P49662 377 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 ALDH5A1P51649 535 aaPredicted RBP14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 CSHL1Q14406 222 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 SPANXN3Q5MJ09 141 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 KRT78Q8N1N4 520 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 DEPDC7Q96QD5 511 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 CRAMP1Q96RY5 1269 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 GINS4Q9BRT9 223 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 C6orf62Q9GZU0 229 aaPredicted RBP14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 ADGRB3O60242 1522 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 SASH3O75995 380 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 PGAM1P18669 254 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 GARTP22102 1010 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 RXRGP48443 463 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 CAMKK2Q96RR4 588 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 CPNE1Q99829 537 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 ERAP1Q9NZ08 941 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 DUSP12Q9UNI6 340 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 MED26O95402 600 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 RFX5P48382 616 aaPredicted RBP14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 DMPKQ09013 629 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 TBX2Q13207 712 aaPredicted RBP14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 MPP3Q13368 585 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 B3GNT6Q6ZMB0 384 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 CCDC149Q6ZUS6 474 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 COLGALT1Q8NBJ5 622 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 OLFM1Q99784 485 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 MTMR12Q9C0I1 747 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 DDIT4Q9NX09 232 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 RAP1GAPP47736 663 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 ORC1Q13415 861 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 CBWD2Q8IUF1 395 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 CD302Q8IX05 232 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 ZCCHC7Q8N3Z6 543 aaKnown RBP14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 CENPTQ96BT3 561 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 SMAD5Q99717 465 aaKnown RBP14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 RERGLQ9H628 205 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 GPAMQ9HCL2 828 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 POLG2Q9UHN1 485 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 VANGL2Q9ULK5 521 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 AP4E1Q9UPM8 1137 aa14.94□□□□□ -0.02
CSNK1D-217ENST00000581241 TPBGLP0DKB5 382 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 HOXD10P28358 340 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 IL12RB1P42701 662 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 NAMPTP43490 491 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 CYP24A1Q07973 514 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 FIG4Q92562 907 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 ZNF75CPQ92670 426 aaPredicted RBP14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 PRCCQ92733 491 aaPredicted RBP14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 APOL4Q9BPW4 351 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 C9orf16Q9BUW7 83 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 KLHL31Q9H511 634 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 TBC1D13Q9NVG8 400 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 UBQLN1Q9UMX0 589 aaKnown RBP14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 AFF2P51816 1311 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 NAB1Q13506 487 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 FASTKQ14296 549 aaKnown RBP14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 FAM228AQ86W67 206 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 SETD9Q8NE22 299 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 CHST13Q8NET6 341 aa14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 ZNF184Q99676 751 aaPredicted RBP14.93□□□□□ -0.02
CSNK1D-217ENST00000581241 ZNF70Q9UC06 446 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms