RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 DNAJC12Q9UKB3 198 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 SLC8A2Q9UPR5 921 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 CEP83Q9Y592 693 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 PCDHGA2Q9Y5H1 932 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 EML5Q05BV3 1969 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 PRR23AA6NEV1 266 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 YJEFN3A6XGL0 299 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 E7ENQ6 273 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 STC2O76061 302 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 FBXO21O94952 628 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 CORO1AP31146 461 aaKnown RBP11.41□□□□□ -0.58
NDEL1-208ENST00000580237 OPRD1P41143 372 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 EIF2DP41214 584 aaKnown RBP11.41□□□□□ -0.58
NDEL1-208ENST00000580237 ACADSBP45954 432 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 DAOAP59103 153 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 PTK2Q05397 1052 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 TYRO3Q06418 890 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 GAS6Q14393 721 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 PREPLQ4J6C6 727 aaPredicted RBP11.41□□□□□ -0.58
NDEL1-208ENST00000580237 PKDCCQ504Y2 493 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 BSPRYQ5W0U4 402 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 PM20D1Q6GTS8 502 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 PMF1Q6P1K2 205 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 DENND1BQ6P3S1 775 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 RHBDF2Q6PJF5 856 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 TPGS1Q6ZTW0 290 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 NUDT18Q6ZVK8 323 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 HTR3DQ70Z44 454 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 ADGRG2Q8IZP9 1017 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 RPLP0P6Q8NHW5 317 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 SLC35F5Q8WV83 523 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 SHC3Q92529 594 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 BHMTQ93088 406 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 WBP2Q969T9 261 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 PLD4Q96BZ4 506 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 HSFY1Q96LI6 401 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 PCMTD1Q96MG8 357 aaPredicted RBP11.41□□□□□ -0.58
NDEL1-208ENST00000580237 NOX5Q96PH1 765 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 PNKPQ96T60 521 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 ZSWIM1Q9BR11 485 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 TRIM62Q9BVG3 475 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 DCLK3Q9C098 648 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 VPS16Q9H269 839 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 PDCL3Q9H2J4 239 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 SEMA4AQ9H3S1 761 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 ABCC13Q9NSE7 274 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 TMEM63CQ9P1W3 806 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 CNTN6Q9UQ52 1028 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 ZNF510Q9Y2H8 683 aa11.41□□□□□ -0.58
NDEL1-208ENST00000580237 RIF1Q5UIP0 2472 aaKnown RBP11.4□□□□□ -0.58
NDEL1-208ENST00000580237 BECN2A8MW95 431 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 PROB1E7EW31 1015 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 HOXC11O43248 304 aaPredicted RBP11.4□□□□□ -0.58
NDEL1-208ENST00000580237 KAT7O95251 611 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 LMNAP02545 664 aaKnown RBP11.4□□□□□ -0.58
NDEL1-208ENST00000580237 LTFP02788 710 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 CYBBP04839 570 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 CDK11BP21127 795 aaKnown RBP11.4□□□□□ -0.58
NDEL1-208ENST00000580237 HARS2P49590 506 aaKnown RBP11.4□□□□□ -0.58
NDEL1-208ENST00000580237 KRT31Q15323 416 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 MEA1Q16626 185 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 C2orf27AQ580R0 203 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 CDKAL1Q5VV42 579 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 GRAMD4Q6IC98 578 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 PKN3Q6P5Z2 889 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 C12orf40Q86WS4 652 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 DENND1CQ8IV53 801 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 PASD1Q8IV76 773 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 FMNL3Q8IVF7 1028 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 SCML4Q8N228 414 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 ZNF276Q8N554 614 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 AOPEPQ8N6M6 819 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 NAT16Q8N8M0 369 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 IPO4Q8TEX9 1081 aaKnown RBP11.4□□□□□ -0.58
NDEL1-208ENST00000580237 ZNF606Q8WXB4 792 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 IRGQQ8WZA9 623 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 XPO6Q96QU8 1125 aaKnown RBP11.4□□□□□ -0.58
NDEL1-208ENST00000580237 SYNCQ9H7C4 482 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 FBRSL1Q9HCM7 1045 aaKnown RBP11.4□□□□□ -0.58
NDEL1-208ENST00000580237 SIX2Q9NPC8 291 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 ACP6Q9NPH0 428 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 DNAJC17Q9NVM6 304 aaKnown RBP11.4□□□□□ -0.58
NDEL1-208ENST00000580237 FANCLQ9NW38 375 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 DEC1Q9P2X7 70 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 RAB23Q9ULC3 237 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 FHOD1Q9Y613 1164 aa11.4□□□□□ -0.58
NDEL1-208ENST00000580237 CHURC1-FNTBB4DL54 471 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 CAPN9O14815 690 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 MSI1O43347 362 aaKnown RBP11.39□□□□□ -0.59
NDEL1-208ENST00000580237 TULP3O75386 442 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 PNMA6AP0CW24 399 aaPredicted RBP11.39□□□□□ -0.59
NDEL1-208ENST00000580237 TYRP14679 529 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 PTPRZ1P23471 2315 aaPredicted RBP11.39□□□□□ -0.59
NDEL1-208ENST00000580237 KRT9P35527 623 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 CHKAP35790 457 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 GRIA2P42262 883 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 SLC6A11P48066 632 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 FNTBP49356 437 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 BPIFB4P59827 614 aa11.39□□□□□ -0.59
NDEL1-208ENST00000580237 PDCLQ13371 301 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms