RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 SCGB1D1O95968 90 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 HSPA1AP0DMV8 641 aaKnown RBP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 HSPA1BP0DMV9 641 aaKnown RBP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ACADMP11310 421 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 RXRAP19793 462 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 MALP21145 153 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 PTGER1P34995 402 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ATP6V1E1P36543 226 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ZNF131P52739 623 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ARFIP2P53365 341 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 PPP3CAQ08209 521 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 SNAPC2Q13487 334 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 MAMLD1Q13495 774 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 RAB32Q13637 225 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 BECN1Q14457 450 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ACAP1Q15027 740 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 RASA2Q15283 850 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ANKRD1Q15327 319 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ATPAF1Q5TC12 328 aaPredicted RBP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 MAP3K21Q5TCX8 1036 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 NAA35Q5VZE5 725 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 NUGGCQ68CJ6 796 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 LIN54Q6MZP7 749 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 USP17L6PQ6QN14 398 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 BBS12Q6ZW61 710 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 TMTC3Q6ZXV5 915 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 UNC13DQ70J99 1090 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 R3HCC1LQ7Z5L2 792 aaKnown RBP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 LCA5Q86VQ0 697 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ARHGEF25Q86VW2 580 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 CHD1LQ86WJ1 897 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 KRT73Q86Y46 540 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ARMC8Q8IUR7 673 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 GLB1L2Q8IW92 636 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 TMEM57Q8N5G2 664 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ARL6IP6Q8N6S5 226 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 VGLL2Q8N8G2 317 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 GLIS1Q8NBF1 620 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 TOR1AIP2Q8NFQ8 470 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 OR2I1PQ8NGU4 316 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 CCDC47Q96A33 483 aaKnown RBP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 LRRC46Q96FV0 321 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 HIST1H2AHQ96KK5 128 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 MRGPRX4Q96LA9 322 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 MRGPRX1Q96LB2 322 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 DMRTA2Q96SC8 542 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 HIST1H2AJQ99878 128 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 NCAPGQ9BPX3 1015 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 NOL10Q9BSC4 688 aaKnown RBP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 TRIM54Q9BYV2 358 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 OSBPL6Q9BZF3 934 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ZNF518BQ9C0D4 1074 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 SIL1Q9H173 461 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 PABPC3Q9H361 631 aaKnown RBP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 TAF1DQ9H5J8 278 aaPredicted RBP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 GRPEL1Q9HAV7 217 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 IL23AQ9NPF7 189 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ATP8A2Q9NTI2 1148 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 PI4KBQ9UBF8 816 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 RPS6KA6Q9UK32 745 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 TMEM5Q9Y2B1 443 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 LRP12Q9Y561 859 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 SNX8Q9Y5X2 465 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 CYP46A1Q9Y6A2 500 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 MAGI3Q5TCQ9 1506 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 PTPRGP23470 1445 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ZNF335Q9H4Z2 1342 aaPredicted RBP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 CUL7Q14999 1698 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 H3BNC9 293 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 FCHO1O14526 889 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 FYB1O15117 783 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 SPTLC2O15270 562 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 ASNA1O43681 348 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 HTATSF1O43719 755 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 AKR1B10O60218 316 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 PHF2O75151 1096 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 ACTL6BO94805 426 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 TK1P04183 234 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 PRKCBP05771 671 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 HNRNPA1P09651 372 aaKnown RBP eCLIP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 MTHFD1P11586 935 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 SCG2P13521 617 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 PORP16435 677 aaPredicted RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 STMN1P16949 149 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 GABRB3P28472 473 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 ARL3P36405 182 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 TNNT3P45378 269 aaPredicted RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 KCNJ5P48544 419 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 CARSP49589 748 aaKnown RBP3.43□□□□□ -1.86
KPNB1-208ENST00000580019 CCR9P51686 369 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 COPAP53621 1224 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 PER3P56645 1201 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 BPIFB4P59827 614 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 OCA2Q04671 838 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 MAP3K12Q12852 859 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 CHAF1BQ13112 559 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 SLC13A2Q13183 592 aa3.43□□□□□ -1.86
KPNB1-208ENST00000580019 PPP2R5CQ13362 524 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms