RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 DONSONQ9NYP3 566 aa2.59□□□□□ -1.99
SNORD53-201ENST00000579969 USP36Q9P275 1121 aaKnown RBP2.59□□□□□ -1.99
SNORD53-201ENST00000579969 TBC1D14Q9P2M4 693 aa2.59□□□□□ -1.99
SNORD53-201ENST00000579969 ITGB1BP2Q9UKP3 347 aa2.59□□□□□ -1.99
SNORD53-201ENST00000579969 SATB2Q9UPW6 733 aa2.59□□□□□ -1.99
SNORD53-201ENST00000579969 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.59□□□□□ -1.99
SNORD53-201ENST00000579969 PCDHB5Q9Y5E4 795 aa2.59□□□□□ -1.99
SNORD53-201ENST00000579969 PCDHGA8Q9Y5G5 932 aa2.59□□□□□ -1.99
SNORD53-201ENST00000579969 TAF6LQ9Y6J9 622 aa2.59□□□□□ -1.99
SNORD53-201ENST00000579969 LRRK1Q38SD2 2015 aa2.59□□□□□ -2
SNORD53-201ENST00000579969 DENND4CQ5VZ89 1909 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 FN1P02751 2386 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 PDZD2O15018 2839 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 PRRT4C9JH25 899 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 K7ERI5 159 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 HIP1O00291 1037 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 TRIM38O00635 465 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 SH2B2O14492 632 aaPredicted RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 EPB41L2O43491 1005 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 PRC1O43663 620 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 VPS4BO75351 444 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 TADA3O75528 432 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 STK10O94804 968 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 NOL4O94818 638 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 TDP2O95551 362 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 SEMA4FO95754 770 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 CLDN1O95832 211 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 IGLV3-19P01714 112 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 WNT1P04628 370 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 KRT7P08729 469 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 ODC1P11926 461 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 XRCC6P12956 609 aaKnown RBP eCLIP2.58□□□□□ -2
SNORD53-201ENST00000579969 PRF1P14222 555 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 HOXB4P17483 251 aaPredicted RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 PFKLP17858 780 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 CYP3A5P20815 502 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 GNLYP22749 145 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 CYP2F1P24903 491 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 MSNP26038 577 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 CD38P28907 300 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 EPHA8P29322 1005 aaPredicted RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 LRPAP1P30533 357 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 ACSL1P33121 698 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 MCM5P33992 734 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 MLLT3P42568 568 aaPredicted RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 UQCRFS1P47985 274 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 AARSP49588 968 aaKnown RBP eCLIP2.58□□□□□ -24e-6■□□□□ 8.1
SNORD53-201ENST00000579969 ZNF132P52740 706 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 BCAT1P54687 386 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 NLRP5P59047 1200 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 LILRA4P59901 499 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 SLC7A9P82251 487 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 SPAG1Q07617 926 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 KCNAB2Q13303 367 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 ZNF211Q13398 564 aaPredicted RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 NAA30Q147X3 362 aaPredicted RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 NFE2Q16621 373 aaPredicted RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 RTN1Q16799 776 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 PFKFB3Q16875 520 aaPredicted RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 ANO4Q32M45 955 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 PROX2Q3B8N5 592 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 SLC10A6Q3KNW5 377 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 MANEAQ5SRI9 462 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 SFMBT2Q5VUG0 894 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 CDCA2Q69YH5 1023 aaPredicted RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 GRAMD4Q6IC98 578 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 CAPRIN2Q6IMN6 1127 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 KLHL10Q6JEL2 608 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 DHX32Q7L7V1 743 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 TMC6Q7Z403 805 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 CLEC14AQ86T13 490 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 HEATR4Q86WZ0 1026 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 METTL23Q86XA0 190 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 TMEM25Q86YD3 366 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 DCP1BQ8IZD4 617 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 MMP21Q8N119 569 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 SLC34A3Q8N130 599 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 SLC25A45Q8N413 288 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 RDH13Q8NBN7 331 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 WDR36Q8NI36 951 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 HTR3CQ8WXA8 447 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 BIRC7Q96CA5 298 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 OTUB2Q96DC9 234 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 TRMT2BQ96GJ1 504 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 ATXN7L3BQ96GX2 97 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 CALR3Q96L12 384 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 DRC1Q96MC2 740 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 CCDC43Q96MW1 224 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 XPO6Q96QU8 1125 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 ACO2Q99798 780 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 ORAI3Q9BRQ5 295 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 LARP6Q9BRS8 491 aaKnown RBP2.58□□□□□ -2
SNORD53-201ENST00000579969 TCHPQ9BT92 498 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 LRRC2Q9BYS8 371 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 C22orf23Q9BZE7 217 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 BTBD1Q9H0C5 482 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 CCDC113Q9H0I3 377 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 DEF6Q9H4E7 631 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 PTPRHQ9HD43 1115 aa2.58□□□□□ -2
SNORD53-201ENST00000579969 GDF3Q9NR23 364 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms