RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 DMAP1Q9NPF5 467 aaPredicted RBP10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 USP36Q9P275 1121 aaKnown RBP10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 ASXL3Q9C0F0 2248 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 URB1O60287 2271 aaKnown RBP10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 KCNJ18B7U540 433 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 TLR5O60602 858 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 NCAM1P13591 858 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 TXLNAP40222 546 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 STAT6P42226 847 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 DGKGP49619 791 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 ZNF132P52740 706 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 CDH8P55286 799 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 CYP24A1Q07973 514 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 ENPP2Q13822 863 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 FUT11Q495W5 492 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 TPGS1Q6ZTW0 290 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 STXBP4Q6ZWJ1 553 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 FUKQ8N0W3 1084 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 ZMIZ2Q8NF64 920 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 SETD7Q8WTS6 366 aaKnown RBP10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 SMARCD1Q96GM5 515 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 LRIG1Q96JA1 1093 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 SMOQ99835 787 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 GPR174Q9BXC1 333 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 MKRN2Q9H000 416 aaKnown RBP10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 GAREM1Q9H706 876 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 VRTNQ9H8Y1 702 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 PRDM16Q9HAZ2 1276 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 TM7SF3Q9NS93 570 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 NXF1Q9UBU9 619 aaKnown RBP10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 STON1Q9Y6Q2 735 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 ATP8B3O60423 1300 aa10.54□□□□□ -0.72
CALCOCO2-227ENST00000575560 METTL12A8MUP2 240 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 NPC1O15118 1278 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 BCAT2O15382 392 aaPredicted RBP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 CILPO75339 1184 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 AP1G2O75843 785 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 BEST1O76090 585 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 IGLV3-19P01714 112 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 ATXN1LP0C7T5 689 aaKnown RBP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 ACO1P21399 889 aaKnown RBP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 ATP5C1P36542 298 aaKnown RBP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 TRPC3Q13507 836 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 CAMK2BQ13554 666 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 HLA-BQ31612 363 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 IL27RAQ6UWB1 636 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 KIAA1324Q6UXG2 1013 aaKnown RBP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 Q6ZNB5 142 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 ZCCHC9Q8N567 271 aaKnown RBP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 SYAP1Q96A49 352 aaPredicted RBP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 CCDC127Q96BQ5 260 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 TNIP3Q96KP6 325 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 CDC6Q99741 560 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 MED10Q9BTT4 135 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 NACA2Q9H009 215 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 FBXO44Q9H4M3 255 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 SMYD3Q9H7B4 428 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 CYLDQ9NQC7 956 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 TLR8Q9NR97 1041 aaKnown RBP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 AGPAT3Q9NRZ7 376 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 OSER1Q9NX31 292 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 THAP10Q9P2Z0 257 aaPredicted RBP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 LSM7Q9UK45 103 aaKnown RBP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 FNDC3AQ9Y2H6 1198 aaKnown RBP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 SLC27A6Q9Y2P4 619 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 PCDHGB2Q9Y5G2 931 aa10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 MORC2Q9Y6X9 1032 aaPredicted RBP10.53□□□□□ -0.72
CALCOCO2-227ENST00000575560 PTPRBP23467 1997 aa10.52□□□□□ -0.72
CALCOCO2-227ENST00000575560 A0A087WV48 116 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 TRABD2BA6NFA1 517 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 MEI4A8MW99 385 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 CLIC2O15247 247 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 EIF3DO15371 548 aaKnown RBP eCLIP10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 CER1O95813 267 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 OXTRP30559 389 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 MATKP42679 507 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 PLA2G4AP47712 749 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 TPMTP51580 245 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 SNRPFP62306 86 aaKnown RBP10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 CYP4F3Q08477 520 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 BMT2Q1RMZ1 405 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 C8orf34Q49A92 452 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 DCAF12L1Q5VU92 463 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 KLHDC10Q6PID8 442 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 TMPRSS6Q8IU80 811 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 CRYBG2Q8N1P7 616 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 XXYLT1Q8NBI6 393 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 RHBDD1Q8TEB9 315 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 COL26A1Q96A83 441 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 NUP58Q9BVL2 599 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 SDCBP2Q9H190 292 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 NMUR1Q9HB89 426 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 KRT82Q9NSB4 513 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 KBTBD4Q9NVX7 518 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 PLK2Q9NYY3 685 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 SCML2Q9UQR0 700 aa10.52□□□□□ -0.73
CALCOCO2-227ENST00000575560 HHLA1C9JL84 531 aa10.51□□□□□ -0.73
CALCOCO2-227ENST00000575560 FLRT2O43155 660 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms