RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171		M0R296	226 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	CLDN5	O00501	218 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	CPNE3	O75131	537 aa	Known RBP	10.3	□□□□□ -0.76
NXN-208	ENST00000575171	HNRNPA1	P09651	372 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
NXN-208	ENST00000575171	HAPLN1	P10915	354 aa	Predicted RBP	10.3	□□□□□ -0.76
NXN-208	ENST00000575171	KRT5	P13647	590 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	CCDC130	P13994	396 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	PON1	P27169	355 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	COL8A1	P27658	744 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	ADORA2B	P29275	332 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	ALDH1A3	P47895	512 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	TUFM	P49411	452 aa	Known RBP	10.3	□□□□□ -0.76
NXN-208	ENST00000575171	GPR15	P49685	360 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	GSK3A	P49840	483 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	KLK7	P49862	253 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	INCA1	Q0VD86	236 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	SMARCB1	Q12824	385 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	PLD1	Q13393	1074 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	MAPRE1	Q15691	268 aa	Known RBP	10.3	□□□□□ -0.76
NXN-208	ENST00000575171	ARHGAP44	Q17R89	818 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	UVSSA	Q2YD98	709 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	FAM171B	Q6P995	826 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	WFDC8	Q8IUA0	241 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	SCN4B	Q8IWT1	228 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	TCEAL8	Q8IYN2	117 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	CACTIN-AS1	Q8N1I8	211 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	ELMOD1	Q8N336	334 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	FEZF2	Q8TBJ5	459 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	GIPC2	Q8TF65	315 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	SMG7	Q92540	1137 aa	Known RBP	10.3	□□□□□ -0.76
NXN-208	ENST00000575171	PCED1B	Q96HM7	432 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	HEXIM2	Q96MH2	286 aa	Known RBP	10.3	□□□□□ -0.76
NXN-208	ENST00000575171	PKMYT1	Q99640	499 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	ADAM7	Q9H2U9	754 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	FAM49B	Q9NUQ9	324 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	APEX2	Q9UBZ4	518 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	MAFF	Q9ULX9	164 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	USP15	Q9Y4E8	981 aa	Predicted RBP	10.3	□□□□□ -0.76
NXN-208	ENST00000575171	CACNA1B	Q00975	2339 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.3	□□□□□ -0.76
NXN-208	ENST00000575171	ATP8B3	O60423	1300 aa		10.3	□□□□□ -0.76
NXN-208	ENST00000575171	CD19	P15391	556 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	BDNF	P23560	247 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	CYP2F1	P24903	491 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	ANXA13	P27216	316 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	GRIK1	P39086	918 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	USP8	P40818	1118 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	EPHB3	P54753	998 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	MFAP3	P55082	362 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	FANCC	Q00597	558 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	GCNT1	Q02742	428 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	ITIH3	Q06033	890 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	RAPGEF1	Q13905	1077 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	VEPH1	Q14D04	833 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	SYCP1	Q15431	976 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	TAF12	Q16514	161 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	PTPN21	Q16825	1174 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	PRRT3	Q5FWE3	981 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	ATAT1	Q5SQI0	421 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	SDHAF4	Q5VUM1	108 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	IQCE	Q6IPM2	695 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	TMEM270	Q6UE05	265 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	GPR149	Q86SP6	731 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	C12orf29	Q8N999	325 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.29	□□□□□ -0.76
NXN-208	ENST00000575171	SMRP1	Q8NCR6	262 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	CMAS	Q8NFW8	434 aa	Predicted RBP	10.29	□□□□□ -0.76
NXN-208	ENST00000575171	SLC2A14	Q8TDB8	520 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	ZNF707	Q96C28	371 aa	Predicted RBP	10.29	□□□□□ -0.76
NXN-208	ENST00000575171	ASIC4	Q96FT7	647 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	TMEM176A	Q96HP8	235 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	RIPOR3	Q96MK2	946 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	KREMEN1	Q96MU8	473 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	ASB16	Q96NS5	453 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	B3GNT5	Q9BYG0	378 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	ZNF518B	Q9C0D4	1074 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	S1PR5	Q9H228	398 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	SIX2	Q9NPC8	291 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	DNAJC12	Q9UKB3	198 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	AJAP1	Q9UKB5	411 aa	Predicted RBP	10.29	□□□□□ -0.76
NXN-208	ENST00000575171	TRIM33	Q9UPN9	1127 aa		10.29	□□□□□ -0.76
NXN-208	ENST00000575171	DENND4A	Q7Z401	1863 aa		10.28	□□□□□ -0.76
NXN-208	ENST00000575171	TPR	P12270	2363 aa	Known RBP	10.28	□□□□□ -0.76
NXN-208	ENST00000575171	ACPP	P15309	386 aa		10.28	□□□□□ -0.76
NXN-208	ENST00000575171	ATF6	P18850	670 aa		10.28	□□□□□ -0.76
NXN-208	ENST00000575171	ACO1	P21399	889 aa	Known RBP	10.28	□□□□□ -0.76
NXN-208	ENST00000575171	SP100	P23497	879 aa	Predicted RBP	10.28	□□□□□ -0.76
NXN-208	ENST00000575171	HOXA9	P31269	272 aa		10.28	□□□□□ -0.76
NXN-208	ENST00000575171	MTHFR	P42898	656 aa		10.28	□□□□□ -0.76
NXN-208	ENST00000575171	RAD23B	P54727	409 aa		10.28	□□□□□ -0.76
NXN-208	ENST00000575171	VCP	P55072	806 aa	Known RBP	10.28	□□□□□ -0.76
NXN-208	ENST00000575171	RPL10A	P62906	217 aa	Known RBP	10.28	□□□□□ -0.76
NXN-208	ENST00000575171	NTHL1	P78549	312 aa		10.28	□□□□□ -0.76
NXN-208	ENST00000575171	ZXDA	P98168	799 aa		10.28	□□□□□ -0.76
NXN-208	ENST00000575171	DDR2	Q16832	855 aa		10.28	□□□□□ -0.76
NXN-208	ENST00000575171	CFAP221	Q4G0U5	840 aa		10.28	□□□□□ -0.76
NXN-208	ENST00000575171	RTL10	Q7L3V2	364 aa		10.28	□□□□□ -0.76
NXN-208	ENST00000575171	ENOSF1	Q7L5Y1	443 aa		10.28	□□□□□ -0.76
NXN-208	ENST00000575171	APTX	Q7Z2E3	356 aa	Known RBP	10.28	□□□□□ -0.76
NXN-208	ENST00000575171	GRASP	Q7Z6J2	395 aa	Predicted RBP	10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms