RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-231ENST00000574875 O00370 1275 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 ZBED1O96006 694 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 APODP05090 189 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 PXNP49023 591 aaPredicted RBP20.43■□□□□ 0.86
ABR-231ENST00000574875 YWHAGP61981 247 aaKnown RBP eCLIP20.43■□□□□ 0.86
ABR-231ENST00000574875 CNGA2Q16280 664 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 ANO4Q32M45 955 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 C2orf27AQ580R0 203 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 LCLAT1Q6UWP7 414 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 PRR23BQ6ZRT6 265 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 C12orf40Q86WS4 652 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 NAT16Q8N8M0 369 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 USP33Q8TEY7 942 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 ACDQ96AP0 544 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 ULBP1Q9BZM6 244 aa20.43■□□□□ 0.86
ABR-231ENST00000574875 INTS2Q9H0H0 1204 aaKnown RBP20.43■□□□□ 0.86
ABR-231ENST00000574875 CCDC163A0A0D9SF12 145 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.42■□□□□ 0.86
ABR-231ENST00000574875 HOXC11O43248 304 aaPredicted RBP20.42■□□□□ 0.86
ABR-231ENST00000574875 KAT7O95251 611 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 SETSIPP0DME0 302 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 GRIA2P42262 883 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 SEC13P55735 322 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 MRPS21P82921 87 aaKnown RBP20.42■□□□□ 0.86
ABR-231ENST00000574875 COG7P83436 770 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 MYL5Q02045 173 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 EFEMP1Q12805 493 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 SRSF5Q13243 272 aaKnown RBP20.42■□□□□ 0.86
ABR-231ENST00000574875 DMC1Q14565 340 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 LPAL2Q16609 132 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 PKDCCQ504Y2 493 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.42■□□□□ 0.86
ABR-231ENST00000574875 MIB1Q86YT6 1006 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 KIAA2013Q8IYS2 634 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 KCTD13Q8WZ19 329 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 CNOT6LQ96LI5 555 aaKnown RBP20.42■□□□□ 0.86
ABR-231ENST00000574875 ARHGEF4Q9NR80 690 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 OTOGLQ3ZCN5 2332 aa20.42■□□□□ 0.86
ABR-231ENST00000574875 STC2O76061 302 aa20.41■□□□□ 0.86
ABR-231ENST00000574875 ERCC5P28715 1186 aaPredicted RBP20.41■□□□□ 0.86
ABR-231ENST00000574875 TNFRSF4P43489 277 aa20.41■□□□□ 0.86
ABR-231ENST00000574875 MESP2Q0VG99 397 aa20.41■□□□□ 0.86
ABR-231ENST00000574875 STILQ15468 1287 aa20.41■□□□□ 0.86
ABR-231ENST00000574875 TPD52L1Q16890 204 aaPredicted RBP20.41■□□□□ 0.86
ABR-231ENST00000574875 PREPLQ4J6C6 727 aaPredicted RBP20.41■□□□□ 0.86
ABR-231ENST00000574875 RSRC2Q7L4I2 434 aaKnown RBP20.41■□□□□ 0.86
ABR-231ENST00000574875 IRF2BP1Q8IU81 584 aa20.41■□□□□ 0.86
ABR-231ENST00000574875 RBBP8NLQ8NC74 664 aaPredicted RBP20.41■□□□□ 0.86
ABR-231ENST00000574875 NDRG1Q92597 394 aaKnown RBP20.41■□□□□ 0.86
ABR-231ENST00000574875 KREMEN1Q96MU8 473 aa20.41■□□□□ 0.86
ABR-231ENST00000574875 UBE2TQ9NPD8 197 aaPredicted RBP20.41■□□□□ 0.86
ABR-231ENST00000574875 WDR35Q9P2L0 1181 aa20.41■□□□□ 0.86
ABR-231ENST00000574875 DEC1Q9P2X7 70 aa20.41■□□□□ 0.86
ABR-231ENST00000574875 RASAL2Q9UJF2 1139 aa20.41■□□□□ 0.86
ABR-231ENST00000574875 ZNF510Q9Y2H8 683 aa20.41■□□□□ 0.86
ABR-231ENST00000574875 ANTXRLA6NF34 631 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 TULP3O75386 442 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 BRD2P25440 801 aaKnown RBP20.4■□□□□ 0.86
ABR-231ENST00000574875 KDSRQ06136 332 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 ADIGQ0VDE8 80 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 LAIR1Q6GTX8 287 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 TPGS1Q6ZTW0 290 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 CEP68Q76N32 757 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 SFTPA1Q8IWL2 248 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 ETFBKMTQ8IXQ9 262 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 CCDC33Q8N5R6 958 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 SLC35F5Q8WV83 523 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 CFAP54Q96N23 3096 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 HHIPQ96QV1 700 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 ZSWIM1Q9BR11 485 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 MARCH2Q9P0N8 246 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 GMEB2Q9UKD1 530 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 STRIP2Q9ULQ0 834 aa20.4■□□□□ 0.86
ABR-231ENST00000574875 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.4■□□□□ 0.86
ABR-231ENST00000574875 GPR179Q6PRD1 2367 aa20.39■□□□□ 0.86
ABR-231ENST00000574875 TBC1D3BA6NDS4 549 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 GOLGA6L6A8MZA4 724 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 CALCAP01258 141 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 KLKB1P03952 638 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 HMBSP08397 361 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 LCP1P13796 627 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 CDC25BP30305 580 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 ZNF132P52740 706 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 EMC10Q5UCC4 262 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 PMF1Q6P1K2 205 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 Q6ZNB5 142 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 NUDT18Q6ZVK8 323 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 SIX6OS1Q8N1H7 587 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 PHTF2Q8N3S3 785 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 GPR161Q8N6U8 529 aaKnown RBP20.39■□□□□ 0.85
ABR-231ENST00000574875 XPO6Q96QU8 1125 aaKnown RBP20.39■□□□□ 0.85
ABR-231ENST00000574875 CRACR2AQ9BSW2 395 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 BBS2Q9BXC9 721 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 TRIM5Q9C035 493 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 DCLK3Q9C098 648 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 CNGB3Q9NQW8 809 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 CNTN6Q9UQ52 1028 aa20.39■□□□□ 0.85
ABR-231ENST00000574875 GVINP1Q7Z2Y8 2422 aa20.38■□□□□ 0.85
ABR-231ENST00000574875 SLC12A8A0AV02 714 aa20.38■□□□□ 0.85
ABR-231ENST00000574875 NEDD8-MDP1E9PL57 170 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms