RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 TRIM50Q86XT4 487 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 MTBPQ96DY7 904 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 PIWIL1Q96J94 861 aaKnown RBP16.22■□□□□ 0.19
NUP88-207ENST00000573584 FAM167AQ96KS9 214 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 TRIM56Q9BRZ2 755 aaKnown RBP16.22■□□□□ 0.19
NUP88-207ENST00000573584 C20orf27Q9GZN8 174 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 ZNF112Q9UJU3 913 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 ANGPTL2Q9UKU9 493 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 ASB3Q9Y575 518 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 AHCYL1O43865 530 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 TM7SF2O76062 418 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 KBTBD2Q8IY47 623 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 PQLC3Q8N755 202 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 CHST13Q8NET6 341 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 PLA2G4CQ9UP65 541 aa16.22■□□□□ 0.19
NUP88-207ENST00000573584 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 IL18RAPO95256 599 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 VDRP11473 427 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 PDK2Q15119 407 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 LY6KQ17RY6 165 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 TRMT10BQ6PF06 316 aaKnown RBP16.21■□□□□ 0.19
NUP88-207ENST00000573584 SLC30A9Q6PML9 568 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 RIPOR1Q6ZS17 1223 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 FAM183BPQ6ZVS7 135 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 PAXIP1Q6ZW49 1069 aaPredicted RBP16.21■□□□□ 0.19
NUP88-207ENST00000573584 ILDR2Q71H61 639 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 ULK2Q8IYT8 1036 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 MAF1Q9H063 256 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 FZD8Q9H461 694 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 MKS1Q9NXB0 559 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 KAT6AQ92794 2004 aa16.21■□□□□ 0.19
NUP88-207ENST00000573584 BPGMP07738 259 aa16.21■□□□□ 0.18
NUP88-207ENST00000573584 TGM2P21980 687 aa16.21■□□□□ 0.18
NUP88-207ENST00000573584 TRMT5Q32P41 509 aaKnown RBP16.21■□□□□ 0.18
NUP88-207ENST00000573584 DNAL1Q4LDG9 190 aa16.21■□□□□ 0.18
NUP88-207ENST00000573584 BOLA3Q53S33 107 aa16.21■□□□□ 0.18
NUP88-207ENST00000573584 METTL7BQ6UX53 244 aa16.21■□□□□ 0.18
NUP88-207ENST00000573584 PCDH19Q8TAB3 1148 aa16.21■□□□□ 0.18
NUP88-207ENST00000573584 LRRC39Q96DD0 335 aa16.21■□□□□ 0.18
NUP88-207ENST00000573584 ZBTB10Q96DT7 871 aa16.21■□□□□ 0.18
NUP88-207ENST00000573584 PANX3Q96QZ0 392 aa16.21■□□□□ 0.18
NUP88-207ENST00000573584 CCDC106Q9BWC9 280 aa16.21■□□□□ 0.18
NUP88-207ENST00000573584 CDT1Q9H211 546 aa16.21■□□□□ 0.18
NUP88-207ENST00000573584 PAPOLBQ9NRJ5 636 aaKnown RBP16.21■□□□□ 0.18
NUP88-207ENST00000573584 HBS1LQ9Y450 684 aaKnown RBP16.21■□□□□ 0.18
NUP88-207ENST00000573584 BCLAF3A2AJT9 711 aaKnown RBP16.2■□□□□ 0.18
NUP88-207ENST00000573584 HMX2A2RU54 273 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 LACTBL1A8MY62 500 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 PRR5-ARHGAP8B1AHC4 643 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 GAS2O43903 313 aaKnown RBP16.2■□□□□ 0.18
NUP88-207ENST00000573584 SNNO75324 88 aaPredicted RBP16.2■□□□□ 0.18
NUP88-207ENST00000573584 CRHR1P34998 444 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 CACNA2D1P54289 1103 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 ARHGAP8P85298 464 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 STX3Q13277 289 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 MAP1SQ66K74 1059 aaPredicted RBP16.2■□□□□ 0.18
NUP88-207ENST00000573584 ZCCHC23Q6ZST2 131 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 MICALL2Q8IY33 904 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 GATA6Q92908 595 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 NGRNQ9NPE2 291 aaKnown RBP16.2■□□□□ 0.18
NUP88-207ENST00000573584 SLC7A8Q9UHI5 535 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 MAGEA13PA6NCF6 341 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 ZBTB42B2RXF5 422 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 GNAT1P11488 350 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 ANPEPP15144 967 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 MAGEA6P43360 314 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 ACTR3P61158 418 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 CDK18Q07002 472 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 CCDC14Q49A88 953 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 JADE1Q6IE81 842 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 STKLD1Q8NE28 680 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 MCUQ8NE86 351 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 GSDMBQ8TAX9 411 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 RAB3IL1Q8TBN0 382 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 EBF4Q9BQW3 602 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 PIDD1Q9HB75 910 aa16.2■□□□□ 0.18
NUP88-207ENST00000573584 IGKV6-21A0A0C4DH24 114 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 BIRC5O15392 142 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 SERPINA6P08185 405 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 GSTA2P09210 222 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 PAPOLAP51003 745 aaKnown RBP16.19■□□□□ 0.18
NUP88-207ENST00000573584 IRX4P78413 519 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 C1orf146Q5VVC0 180 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 MPP5Q8N3R9 675 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 TRAPPC12Q8WVT3 735 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 SIGLEC10Q96LC7 697 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 EBNA1BP2Q99848 306 aaKnown RBP16.19■□□□□ 0.18
NUP88-207ENST00000573584 SH3GL3Q99963 347 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 CYP3A43Q9HB55 503 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 PCDH18Q9HCL0 1135 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 THAP1Q9NVV9 213 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 C2CD2Q9Y426 696 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 GPR25O00155 361 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 TOP3BO95985 862 aaKnown RBP16.19■□□□□ 0.18
NUP88-207ENST00000573584 AP2B1P63010 937 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 UBAP2LQ14157 1087 aaKnown RBP16.19■□□□□ 0.18
NUP88-207ENST00000573584 TBCCQ15814 346 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 PPP6R3Q5H9R7 873 aaPredicted RBP16.19■□□□□ 0.18
NUP88-207ENST00000573584 PPP1R14CQ8TAE6 165 aa16.19■□□□□ 0.18
NUP88-207ENST00000573584 TTC1Q99614 292 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms