RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 VDRP11473 427 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 RARGP13631 454 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 DRD1P21728 446 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 ATP5C1P36542 298 aaKnown RBP9.55□□□□□ -0.88
NDE1-207ENST00000573203 PGFP49763 221 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 KIF11P52732 1056 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 FANCCQ00597 558 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 SATB1Q01826 763 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 GOLGA7BQ2TAP0 167 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 FSTL4Q6MZW2 842 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 TMEM270Q6UE05 265 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 CCDC186Q7Z3E2 898 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 ANKRD52Q8NB46 1076 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 EHBP1Q8NDI1 1231 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 CD101Q93033 1021 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 CNOT6LQ96LI5 555 aaKnown RBP9.55□□□□□ -0.88
NDE1-207ENST00000573203 MED15Q96RN5 788 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 FAM126AQ9BYI3 521 aaPredicted RBP9.55□□□□□ -0.88
NDE1-207ENST00000573203 UBXN6Q9BZV1 441 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 NMUR1Q9HB89 426 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 FANCLQ9NW38 375 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 NAGPAQ9UK23 515 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 TSPAN16Q9UKR8 245 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 KIAA1257Q9ULG3 409 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 PCDHGA2Q9Y5H1 932 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 MYO15AQ9UKN7 3530 aa9.55□□□□□ -0.88
NDE1-207ENST00000573203 ATG13O75143 517 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 RNF40O75150 1001 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 ADH1CP00326 375 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 PAEPP09466 180 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 RALAP11233 206 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 MTIF2P46199 727 aaKnown RBP9.54□□□□□ -0.88
NDE1-207ENST00000573203 BCAT1P54687 386 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 GOLGA8FQ08AF8 430 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 GOLGA8DPQ0D2H9 430 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 BST2Q10589 180 aaKnown RBP9.54□□□□□ -0.88
NDE1-207ENST00000573203 DHCR24Q15392 516 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 FBXO43Q4G163 708 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 C10orf120Q5SQS8 335 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 CDKAL1Q5VV42 579 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 NAIF1Q69YI7 327 aaPredicted RBP9.54□□□□□ -0.88
NDE1-207ENST00000573203 RRAGAQ7L523 313 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 TADA2BQ86TJ2 420 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 PIGZQ86VD9 579 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 TTC30AQ86WT1 665 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 ARHGEF19Q8IW93 802 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 ADGRG2Q8IZP9 1017 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 UBR7Q8N806 425 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 ZBTB44Q8NCP5 570 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 LMO3Q8TAP4 145 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 KAT5Q92993 513 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 OTUB2Q96DC9 234 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 INTS2Q9H0H0 1204 aaKnown RBP9.54□□□□□ -0.88
NDE1-207ENST00000573203 LRRC4Q9HBW1 653 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 FBRSL1Q9HCM7 1045 aaKnown RBP9.54□□□□□ -0.88
NDE1-207ENST00000573203 CYLDQ9NQC7 956 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 KCND1Q9NSA2 647 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 OSER1Q9NX31 292 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 NUDT5Q9UKK9 219 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 NFE2L3Q9Y4A8 694 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 USP3Q9Y6I4 520 aa9.54□□□□□ -0.88
NDE1-207ENST00000573203 O00370 1275 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 XPO1O14980 1071 aaKnown RBP9.53□□□□□ -0.88
NDE1-207ENST00000573203 MDM4O15151 490 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 GPR37O15354 613 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 PAPSS2O95340 614 aaPredicted RBP9.53□□□□□ -0.88
NDE1-207ENST00000573203 ZBED1O96006 694 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 SETSIPP0DME0 302 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 ADH5P11766 374 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 TDGF1P13385 188 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 TKTL1P51854 596 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 UBASH3AP57075 661 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 GCNT1Q02742 428 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 PDE4CQ08493 712 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 NR1I3Q14994 352 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 RAB41Q5JT25 222 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 LY6G5CQ5SRR4 150 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 HEATR6Q6AI08 1181 aaKnown RBP9.53□□□□□ -0.88
NDE1-207ENST00000573203 PKN3Q6P5Z2 889 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 RHBDF2Q6PJF5 856 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 SCD5Q86SK9 330 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 BBS7Q8IWZ6 715 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 DRC7Q8IY82 874 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 ARHGAP18Q8N392 663 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 RBBP8NLQ8NC74 664 aaPredicted RBP9.53□□□□□ -0.88
NDE1-207ENST00000573203 CCDC26Q8TAB7 109 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 UBA3Q8TBC4 463 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 KIAA1524Q8TCG1 905 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 NELL1Q92832 810 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 WBP2Q969T9 261 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 CDK5RAP1Q96SZ6 601 aaKnown RBP9.53□□□□□ -0.88
NDE1-207ENST00000573203 HINFPQ9BQA5 517 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 CRACR2AQ9BSW2 395 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 KLF16Q9BXK1 252 aaPredicted RBP9.53□□□□□ -0.88
NDE1-207ENST00000573203 ULBP1Q9BZM6 244 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 XPO4Q9C0E2 1151 aaKnown RBP9.53□□□□□ -0.88
NDE1-207ENST00000573203 RRAGDQ9NQL2 400 aaPredicted RBP9.53□□□□□ -0.88
NDE1-207ENST00000573203 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.53□□□□□ -0.88
NDE1-207ENST00000573203 IFNKQ9P0W0 207 aa9.53□□□□□ -0.88
NDE1-207ENST00000573203 DNMT3LQ9UJW3 386 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms