RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PRSS50Q9UI38 385 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SCOCQ9UIL1 159 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 TUBE1Q9UJT0 475 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 LEF1Q9UJU2 399 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 DAPP1Q9UN19 280 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 TRPV2Q9Y5S1 764 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 KDRP35968 1356 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 TCRBV5S4A2TA0A5A2 114 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 MBD3L4A6NDZ8 208 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 MBD3L3A6NE82 208 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 LRRC72A6NJI9 287 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 EFCAB8A8MWE9 144 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 STX16-NPEPL1H3BU86 382 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 STX16O14662 325 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 ANGPT2O15123 496 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 BCAT2O15382 392 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CA12O43570 354 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 DYRK3O43781 588 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 PRPF6O94906 941 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 PLGP00747 810 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CTSBP07858 339 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 INHBAP08476 426 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 SUPT20HL2P0C7V6 817 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 PRR35P0CG20 571 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 TXNP10599 105 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 MAPTP10636 758 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 GHRP10912 638 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 IL1R1P14778 569 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CPA1P15085 419 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CDH2P19022 906 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CASTP20810 708 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 KLRC1P26715 233 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 IL1R2P27930 398 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 HSD17B2P37059 387 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RABIFP47224 123 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CAMLGP49069 296 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 LIG4P49917 911 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CPT1AP50416 773 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RBM5P52756 815 aaKnown RBP eCLIP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 PRAMEP78395 509 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 PPATQ06203 517 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 TRDNQ13061 729 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 IKQ13123 557 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 SNW1Q13573 536 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RAB32Q13637 225 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 GAS6Q14393 721 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 HABP2Q14520 560 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RAB39AQ14964 217 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CLCA4Q14CN2 919 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 PDK1Q15118 436 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RPS6KA2Q15349 733 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 MAN2A1Q16706 1144 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 INSCQ1MX18 579 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CRY2Q49AN0 593 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 ZRANB3Q5FWF4 1079 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 HABP4Q5JVS0 413 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 COLEC12Q5KU26 742 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 TTC22Q5TAA0 569 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 AP1ARQ63HQ0 302 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 KLHL35Q6PF15 583 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 FAM180AQ6UWF9 173 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 SUSD1Q6UWL2 747 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 KIAA0408Q6ZU52 694 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 BNIPLQ7Z465 357 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 TAF8Q7Z7C8 310 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CDH24Q86UP0 819 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RFX6Q8HWS3 928 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 LRRC49Q8IUZ0 686 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CNTN4Q8IWV2 1026 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RHOT1Q8IXI2 618 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 YAF2Q8IY57 180 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 PDCL2Q8N4E4 241 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 TNIP2Q8NFZ5 429 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 AGR3Q8TD06 166 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 DCAF11Q8TEB1 546 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 CPT1BQ92523 772 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RABGGTAQ92696 567 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 PRCCQ92733 491 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 PTCHD1Q96NR3 888 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 GBP4Q96PP9 640 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RUFY1Q96T51 708 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 MYL10Q9BUA6 226 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 MLPHQ9BV36 600 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 HERC2P3Q9BVR0 1158 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 PACSIN1Q9BY11 444 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 SLC5A7Q9GZV3 580 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 SMG9Q9H0W8 520 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 WNT5BQ9H1J7 359 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 KAT14Q9H8E8 782 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RXFP1Q9HBX9 757 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 LTB4R2Q9NPC1 389 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 HEYLQ9NQ87 328 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 HOMER3Q9NSC5 361 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RBM12Q9NTZ6 932 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 SEC63Q9UGP8 760 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 LIMA1Q9UHB6 759 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RCOR1Q9UKL0 485 aa5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 ZMYND8Q9ULU4 1186 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 RPH3AQ9Y2J0 694 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-210ENST00000572787 MED16Q9Y2X0 877 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms