RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 CDK5RAP1Q96SZ6 601 aaKnown RBP14.34□□□□□ -0.11
PRPF8-202ENST00000571346 DUSP9Q99956 384 aaKnown RBP14.34□□□□□ -0.11
PRPF8-202ENST00000571346 CLIC5Q9NZA1 410 aa14.34□□□□□ -0.11
PRPF8-202ENST00000571346 INVSQ9Y283 1065 aa14.34□□□□□ -0.11
PRPF8-202ENST00000571346 USP3Q9Y6I4 520 aa14.34□□□□□ -0.11
PRPF8-202ENST00000571346 SGK1O00141 431 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 TULP2O00295 520 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 TRIM24O15164 1050 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 GREM1O60565 184 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 ALDH1A2O94788 518 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 BMP6P22004 513 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 PLA2G4AP47712 749 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 YWHAGP61981 247 aaKnown RBP eCLIP14.33□□□□□ -0.12
PRPF8-202ENST00000571346 PDE4CQ08493 712 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 ADIGQ0VDE8 80 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 BST2Q10589 180 aaKnown RBP14.33□□□□□ -0.12
PRPF8-202ENST00000571346 CETN1Q12798 172 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 MORC3Q14149 939 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 CRY1Q16526 586 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 CSRP2Q16527 193 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 PLK5Q496M5 336 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 EOGTQ5NDL2 527 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 EMC10Q5UCC4 262 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 KLHDC10Q6PID8 442 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 TMEM92Q6UXU6 159 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 HTR3DQ70Z44 454 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 SIX6OS1Q8N1H7 587 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 ARHGAP18Q8N392 663 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 ZNF513Q8N8E2 541 aaPredicted RBP14.33□□□□□ -0.12
PRPF8-202ENST00000571346 C12orf50Q8NA57 414 aaPredicted RBP14.33□□□□□ -0.12
PRPF8-202ENST00000571346 NETO1Q8TDF5 533 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 HMGB4Q8WW32 186 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 CNOT6LQ96LI5 555 aaKnown RBP14.33□□□□□ -0.12
PRPF8-202ENST00000571346 IPO9Q96P70 1041 aaKnown RBP14.33□□□□□ -0.12
PRPF8-202ENST00000571346 XPO6Q96QU8 1125 aaKnown RBP14.33□□□□□ -0.12
PRPF8-202ENST00000571346 ULBP1Q9BZM6 244 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 LRRC4Q9HBW1 653 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 EBF1Q9UH73 591 aa14.33□□□□□ -0.12
PRPF8-202ENST00000571346 SDK1Q7Z5N4 2213 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 TCRBV21S2A2A0A5A6 115 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 PPP1R3GB7ZBB8 358 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 XPO1O14980 1071 aaKnown RBP14.32□□□□□ -0.12
PRPF8-202ENST00000571346 STC2O76061 302 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 ZBED1O96006 694 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 HNRNPLP14866 589 aaKnown RBP eCLIP14.32□□□□□ -0.12
PRPF8-202ENST00000571346 KCNA4P22459 653 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 CORO1AP31146 461 aaKnown RBP14.32□□□□□ -0.12
PRPF8-202ENST00000571346 MPLP40238 635 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 TNFRSF4P43489 277 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 KIR2DL1P43626 348 aaPredicted RBP14.32□□□□□ -0.12
PRPF8-202ENST00000571346 SF3A2Q15428 464 aaKnown RBP14.32□□□□□ -0.12
PRPF8-202ENST00000571346 USP39Q53GS9 565 aaKnown RBP14.32□□□□□ -0.12
PRPF8-202ENST00000571346 NUDT18Q6ZVK8 323 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 TRMT11Q7Z4G4 463 aaKnown RBP14.32□□□□□ -0.12
PRPF8-202ENST00000571346 UBA3Q8TBC4 463 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 LOXL4Q96JB6 756 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 SPACA7Q96KW9 195 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 SMOC1Q9H4F8 434 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 POLMQ9NP87 494 aaPredicted RBP14.32□□□□□ -0.12
PRPF8-202ENST00000571346 PLK2Q9NYY3 685 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 MARCH2Q9P0N8 246 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 STRIP2Q9ULQ0 834 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 PCDHB4Q9Y5E5 795 aa14.32□□□□□ -0.12
PRPF8-202ENST00000571346 SLC12A8A0AV02 714 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 MED19A0JLT2 244 aaPredicted RBP14.31□□□□□ -0.12
PRPF8-202ENST00000571346 M0QYV0 167 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 O00370 1275 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 CACNG3O60359 315 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 GDF9O60383 454 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 ADAM23O75077 832 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 SETSIPP0DME0 302 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 VDRP11473 427 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 HOXB2P14652 356 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 WASP42768 502 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 ATXN1P54253 815 aaKnown RBP14.31□□□□□ -0.12
PRPF8-202ENST00000571346 CREB5Q02930 508 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 CAMK4Q16566 473 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 HSF5Q4G112 596 aaPredicted RBP14.31□□□□□ -0.12
PRPF8-202ENST00000571346 RAB41Q5JT25 222 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 Q6ZNB5 142 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 RASSF3Q86WH2 238 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 PGBD3Q8N328 593 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 UBR7Q8N806 425 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 NDRG1Q92597 394 aaKnown RBP14.31□□□□□ -0.12
PRPF8-202ENST00000571346 KAT5Q92993 513 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 ERLEC1Q96DZ1 483 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 DUSP15Q9H1R2 295 aaPredicted RBP14.31□□□□□ -0.12
PRPF8-202ENST00000571346 MARK1Q9P0L2 795 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 WDR35Q9P2L0 1181 aa14.31□□□□□ -0.12
PRPF8-202ENST00000571346 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRPF8-202ENST00000571346 NCOR2Q9Y618 2525 aa14.3□□□□□ -0.12
PRPF8-202ENST00000571346 DCDC2BA2VCK2 349 aa14.3□□□□□ -0.12
PRPF8-202ENST00000571346 PIK3R2O00459 728 aa14.3□□□□□ -0.12
PRPF8-202ENST00000571346 FOXD2O60548 495 aaPredicted RBP14.3□□□□□ -0.12
PRPF8-202ENST00000571346 RHOBTB1O94844 696 aa14.3□□□□□ -0.12
PRPF8-202ENST00000571346 GNA14O95837 355 aa14.3□□□□□ -0.12
PRPF8-202ENST00000571346 CALCAP01258 141 aa14.3□□□□□ -0.12
PRPF8-202ENST00000571346 AFPP02771 609 aaKnown RBP14.3□□□□□ -0.12
PRPF8-202ENST00000571346 CHRM1P11229 460 aaPredicted RBP14.3□□□□□ -0.12
PRPF8-202ENST00000571346 LCP1P13796 627 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms