RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 TUBGCP4Q9UGJ1 667 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 DDX25Q9UHL0 483 aaKnown RBP7.42□□□□□ -1.22
CHD3-213ENST00000571249 FKBPLQ9UIM3 349 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 ARHGAP26Q9UNA1 814 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 RTTNQ86VV8 2226 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 LEFTY2O00292 366 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 TRIM38O00635 465 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 ZBTB43O43298 467 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 SLC37A4O43826 429 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 TULP3O75386 442 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 CDC45O75419 566 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 ADH1CP00326 375 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 WNT1P04628 370 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 NFICP08651 508 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 CSH1P0DML2 217 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 CSH2P0DML3 217 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 ADH5P11766 374 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 HDCP19113 662 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 TYMPP19971 482 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 CDC27P30260 824 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 AARSP49588 968 aaKnown RBP eCLIP7.41□□□□□ -1.22
CHD3-213ENST00000571249 KCNAB2Q13303 367 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 ZNF211Q13398 564 aaPredicted RBP7.41□□□□□ -1.22
CHD3-213ENST00000571249 KCNB1Q14721 858 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 FUT11Q495W5 492 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 PPP1R26Q5T8A7 1209 aaPredicted RBP7.41□□□□□ -1.22
CHD3-213ENST00000571249 APOA5Q6Q788 366 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 IGF2-ASQ6U949 168 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 LYPD8Q6UX82 237 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 DPH6Q7L8W6 267 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 ADAT2Q7Z6V5 191 aaKnown RBP7.41□□□□□ -1.22
CHD3-213ENST00000571249 VASH2Q86V25 355 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 LRRTM3Q86VH5 581 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 NSUN7Q8NE18 718 aaKnown RBP7.41□□□□□ -1.22
CHD3-213ENST00000571249 PDCD6IPQ8WUM4 868 aaKnown RBP7.41□□□□□ -1.22
CHD3-213ENST00000571249 MARVELD3Q96A59 401 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 DEPDC7Q96QD5 511 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 ZCWPW1Q9H0M4 648 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 CDT1Q9H211 546 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 ANO2Q9NQ90 1003 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 ANKEF1Q9NU02 776 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 ABI2Q9NYB9 513 aaPredicted RBP7.41□□□□□ -1.22
CHD3-213ENST00000571249 BRPF3Q9ULD4 1205 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 TNFSF13BQ9Y275 285 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.41□□□□□ -1.22
CHD3-213ENST00000571249 UBE4BO95155 1302 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 STK36Q9NRP7 1315 aa7.41□□□□□ -1.22
CHD3-213ENST00000571249 MAP1AP78559 2803 aaPredicted RBP7.4□□□□□ -1.22
CHD3-213ENST00000571249 ARHGAP10A1A4S6 786 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 GOLGA8AA7E2F4 631 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 GOLGA8BA8MQT2 603 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 PRRT4C9JH25 899 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 CYP26A1O43174 497 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 SIGLEC6O43699 453 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 DFNA5O60443 496 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 PRMT3O60678 531 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 TNFSF15O95150 251 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 EPHA8P29322 1005 aaPredicted RBP7.4□□□□□ -1.22
CHD3-213ENST00000571249 OXTRP30559 389 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 ACSL1P33121 698 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 RARRES1P49788 294 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 POLE2P56282 527 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 SPAG1Q07617 926 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 MORC3Q14149 939 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 DDR2Q16832 855 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 ISXQ2M1V0 245 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 ZNF568Q3ZCX4 644 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 LY6G5CQ5SRR4 150 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 SWT1Q5T5J6 900 aaKnown RBP7.4□□□□□ -1.22
CHD3-213ENST00000571249 NOP9Q86U38 636 aaKnown RBP7.4□□□□□ -1.22
CHD3-213ENST00000571249 FAM114A1Q8IWE2 563 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 ETFBKMTQ8IXQ9 262 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 SPPL2BQ8TCT7 592 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 C2orf15Q8WU43 125 aaKnown RBP7.4□□□□□ -1.22
CHD3-213ENST00000571249 BIRC7Q96CA5 298 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 MDFIQ99750 246 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 KIFC3Q9BVG8 833 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 NUP58Q9BVL2 599 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 C22orf23Q9BZE7 217 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 ADNPQ9H2P0 1102 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 TTC12Q9H892 705 aaPredicted RBP7.4□□□□□ -1.22
CHD3-213ENST00000571249 OSGEPQ9NPF4 335 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 CASS4Q9NQ75 786 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 DEC1Q9P2X7 70 aa7.4□□□□□ -1.22
CHD3-213ENST00000571249 UXTQ9UBK9 157 aaPredicted RBP7.4□□□□□ -1.22
CHD3-213ENST00000571249 ZNF469Q96JG9 3925 aaPredicted RBP7.4□□□□□ -1.22
CHD3-213ENST00000571249 OBSL1O75147 1896 aa7.4□□□□□ -1.23
CHD3-213ENST00000571249 PCSK5Q92824 1860 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 SLC9A3R1O14745 358 aaPredicted RBP7.39□□□□□ -1.23
CHD3-213ENST00000571249 WNT9AO14904 365 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 EPB41L2O43491 1005 aaKnown RBP7.39□□□□□ -1.23
CHD3-213ENST00000571249 PRPF40AO75400 957 aaKnown RBP7.39□□□□□ -1.23
CHD3-213ENST00000571249 NOL4O94818 638 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 FSBPO95073 299 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 LYPLA2O95372 231 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 C8BP07358 591 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 THEGLP0DJG4 465 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 HARSP12081 509 aaKnown RBP7.39□□□□□ -1.23
CHD3-213ENST00000571249 LRPAP1P30533 357 aa7.39□□□□□ -1.23
CHD3-213ENST00000571249 ADD1P35611 737 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms