RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 RALAP11233 206 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 RARGP13631 454 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 TGM1P22735 817 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 GRIA2P42262 883 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 SLC6A11P48066 632 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 RAD23BP54727 409 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 MRPS21P82921 87 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 ARHGAP17Q68EM7 881 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 KLHL10Q6JEL2 608 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 KLHDC10Q6PID8 442 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 C12orf40Q86WS4 652 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 CCDC33Q8N5R6 958 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 CDK5RAP1Q96SZ6 601 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 KLF16Q9BXK1 252 aaPredicted RBP13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 NMUR1Q9HB89 426 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 SPHK2Q9NRA0 654 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 SEMA4GQ9NTN9 838 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 OSER1Q9NX31 292 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 DLL3Q9NYJ7 618 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 EBF1Q9UH73 591 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 DNMT3LQ9UJW3 386 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 MMP17Q9ULZ9 603 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 DNAH14Q0VDD8 3507 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 BICDL2A1A5D9 508 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 FOXD2O60548 495 aaPredicted RBP13□□□□□ -0.33
CTDNEP1-205ENST00000570828 TBXAS1P24557 533 aaPredicted RBP13□□□□□ -0.33
CTDNEP1-205ENST00000570828 FMO5P49326 533 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 DGKEP52429 567 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 MESP2Q0VG99 397 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 CETN1Q12798 172 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 ELF2Q15723 593 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 CSRP2Q16527 193 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 GOLGA7BQ2TAP0 167 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 HSF5Q4G112 596 aaPredicted RBP13□□□□□ -0.33
CTDNEP1-205ENST00000570828 SGO2Q562F6 1265 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 ANO7Q6IWH7 933 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 NUDT18Q6ZVK8 323 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 HTR3DQ70Z44 454 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 KBTBD6Q86V97 674 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 TMEM25Q86YD3 366 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 MIB1Q86YT6 1006 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 ARHGAP18Q8N392 663 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 NAT16Q8N8M0 369 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 NELFBQ8WX92 580 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 WBP2Q969T9 261 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 LOXL4Q96JB6 756 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 CLIC5Q9NZA1 410 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 DEC1Q9P2X7 70 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 HESX1Q9UBX0 185 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 NUDT5Q9UKK9 219 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 CTNND2Q9UQB3 1225 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 DYNC1LI1Q9Y6G9 523 aaKnown RBP13□□□□□ -0.33
CTDNEP1-205ENST00000570828 USP3Q9Y6I4 520 aa13□□□□□ -0.33
CTDNEP1-205ENST00000570828 TBC1D3BA6NDS4 549 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 NEDD8-MDP1E9PL57 170 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 MDM4O15151 490 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 TULP3O75386 442 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 ALDH1A2O94788 518 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 EPN2O95208 641 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 KLF8O95600 359 aaPredicted RBP12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 CD19P15391 556 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 TNFRSF4P43489 277 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 PLA2G4AP47712 749 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 BCAT1P54687 386 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 LRMPQ12912 555 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 CRY1Q16526 586 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 TTI2Q6NXR4 508 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 PRR23CQ6ZRP0 262 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 RSRC2Q7L4I2 434 aaKnown RBP12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 TRMT11Q7Z4G4 463 aaKnown RBP12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 SCD5Q86SK9 330 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 PIGZQ86VD9 579 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 TTC30AQ86WT1 665 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 SFTPA1Q8IWL2 248 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 ETFBKMTQ8IXQ9 262 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 ALLCQ8N6M5 410 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 ANKRD52Q8NB46 1076 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 TXNDC5Q8NBS9 432 aaKnown RBP12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 BBS2Q9BXC9 721 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 TSPAN16Q9UKR8 245 aa12.99□□□□□ -0.33
CTDNEP1-205ENST00000570828 BIN1O00499 593 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 GREM1O60565 184 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 GADD45BO75293 160 aaPredicted RBP12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 GBP1P32455 592 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 TKTL1P51854 596 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 BST2Q10589 180 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 EFEMP1Q12805 493 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 PAK1Q13153 545 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 MORC3Q14149 939 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 USP39Q53GS9 565 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 EOGTQ5NDL2 527 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 C10orf76Q5T2E6 689 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 GRAMD4Q6IC98 578 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 FOXR2Q6PJQ5 311 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 C11orf74Q86VG3 221 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 RASSF3Q86WH2 238 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 PHTF2Q8N3S3 785 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 ZNF276Q8N554 614 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 TERB1Q8NA31 727 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms