RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 NACA2Q9H009 215 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 PNPLA8Q9NP80 782 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 VPS45Q9NRW7 570 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 RAB20Q9NX57 234 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 MARK1Q9P0L2 795 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 PCDHA5Q9Y5H7 936 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 PCDH15Q96QU1 1955 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 CKAP5Q14008 2032 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 TCRBV21S2A2A0A5A6 115 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 LNP1A1A4G5 178 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 NEDD8-MDP1E9PL57 170 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 CISD3P0C7P0 127 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 TYRP14679 529 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 GABRG2P18507 467 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 ATP5C1P36542 298 aaKnown RBP14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 PTGER3P43115 390 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 ELF2Q15723 593 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 USP39Q53GS9 565 aaKnown RBP14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 C10orf76Q5T2E6 689 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 KLHDC10Q6PID8 442 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 TPGS1Q6ZTW0 290 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 PIGZQ86VD9 579 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 ZNF513Q8N8E2 541 aaPredicted RBP14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 FBXL13Q8NEE6 735 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 HMGB4Q8WW32 186 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 BHMTQ93088 406 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 CD93Q9NPY3 652 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 DNAJC17Q9NVM6 304 aaKnown RBP14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 PLK2Q9NYY3 685 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 DEC1Q9P2X7 70 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 NAGPAQ9UK23 515 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 COQ4Q9Y3A0 265 aa14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 MUC22E2RYF6 1773 aaPredicted RBP14.57□□□□□ -0.08
GTF3C1-211ENST00000569653 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 TBC1D3BA6NDS4 549 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 GOLGA6L4A6NEF3 574 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 GABBR2O75899 941 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 RHOBTB1O94844 696 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 CAVIN2O95810 425 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 BMP6P22004 513 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 HSF5Q4G112 596 aaPredicted RBP14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 COBLL1Q53SF7 1204 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 RAB41Q5JT25 222 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 C10orf120Q5SQS8 335 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 N4BP2L1Q5TBK1 243 aaPredicted RBP14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 ZNF658Q5TYW1 1059 aaPredicted RBP14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 ARHGAP17Q68EM7 881 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 GRAMD4Q6IC98 578 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 ARMCX6Q7L4S7 300 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 TMEFF1Q8IYR6 380 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 CCDC26Q8TAB7 109 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 SLC35C1Q96A29 364 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 CCDC34Q96HJ3 373 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 TMEM176AQ96HP8 235 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 HEXIM2Q96MH2 286 aaKnown RBP14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 ZSWIM1Q9BR11 485 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 EDEM2Q9BV94 578 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 BBS2Q9BXC9 721 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 SLC6A17Q9H1V8 727 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 TMEM74BQ9NUR3 256 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 CIZ1Q9ULV3 898 aaPredicted RBP14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 CLEC4EQ9ULY5 219 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 STARD13Q9Y3M8 1113 aa14.56□□□□□ -0.08
GTF3C1-211ENST00000569653 ZZEF1O43149 2961 aa14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 PCNX2A6NKB5 2137 aa14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 CDX4O14627 284 aaPredicted RBP14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 GIPC1O14908 333 aa14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 CETN3O15182 167 aa14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 FOXD2O60548 495 aaPredicted RBP14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 CALCAP01258 141 aa14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 EPB41P11171 864 aaKnown RBP14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 KCNA4P22459 653 aa14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 DCAF17Q5H9S7 520 aaPredicted RBP14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 EOGTQ5NDL2 527 aa14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 ZNF276Q8N554 614 aa14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 LSM14BQ9BX40 385 aaKnown RBP14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 DNMT3LQ9UJW3 386 aa14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 FBXO10Q9UK96 956 aa14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 RAD54BQ9Y620 910 aa14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 ATXN2Q99700 1313 aaKnown RBP14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 CFAP47Q6ZTR5 3102 aa14.55□□□□□ -0.08
GTF3C1-211ENST00000569653 NUMA1Q14980 2115 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 SPEGQ15772 3267 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 C4orf47A7E2U8 309 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 WASH3PC4AMC7 463 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 PENKP01210 267 aaPredicted RBP14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 HMBSP08397 361 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 HOXB2P14652 356 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 NDUFV2P19404 249 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 PLA2G4AP47712 749 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 DHPSP49366 369 aaPredicted RBP14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 IRX4P78413 519 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 PDE4CQ08493 712 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 EFEMP1Q12805 493 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 CUL2Q13617 745 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 GOLGA7BQ2TAP0 167 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 FYB2Q5VWT5 728 aa14.54□□□□□ -0.08
GTF3C1-211ENST00000569653 BTBD8Q5XKL5 378 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms