RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 CACNG3O60359 315 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 TBX18O95935 607 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 NR3C1P04150 777 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 CFIP05156 583 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 MYL1P05976 194 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 IRF1P10914 325 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 HOXB2P14652 356 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 GABRG2P18507 467 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 ASPAP45381 313 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 FAM193AP78312 1265 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 GOLGA8FQ08AF8 430 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 GOLGA8DPQ0D2H9 430 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 KMT5BQ4FZB7 885 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 GRAMD4Q6IC98 578 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 SDE2Q6IQ49 451 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 KLHDC10Q6PID8 442 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 C12orf29Q8N999 325 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 CEP76Q8TAP6 659 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 XPO6Q96QU8 1125 aaKnown RBP15.88■□□□□ 0.13
COMMD4-223ENST00000568301 GTPBP2Q9BX10 602 aaKnown RBP15.88■□□□□ 0.13
COMMD4-223ENST00000568301 MARK1Q9P0L2 795 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 USP25Q9UHP3 1055 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 LHX6Q9UPM6 363 aa15.88■□□□□ 0.13
COMMD4-223ENST00000568301 A0A1W2PQF6 199 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 UPK3BL1B0FP48 263 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 UPK3BL2E5RIL1 263 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 TAF4O00268 1085 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 MAPK13O15264 365 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 ACTN4O43707 911 aaKnown RBP15.87■□□□□ 0.13
COMMD4-223ENST00000568301 ZNF217O75362 1048 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 FAM200BP0CF97 657 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 TYRP14679 529 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 INCA1Q0VD86 236 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 ACAP1Q15027 740 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 DUOXA1Q1HG43 343 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 ZNF276Q8N554 614 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 BBS2Q9BXC9 721 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 CYP3A43Q9HB55 503 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 CD248Q9HCU0 757 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 PNPLA8Q9NP80 782 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.87■□□□□ 0.13
COMMD4-223ENST00000568301 FAM49BQ9NUQ9 324 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 DNAJC17Q9NVM6 304 aaKnown RBP15.87■□□□□ 0.13
COMMD4-223ENST00000568301 HMGXB4Q9UGU5 601 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 LSM7Q9UK45 103 aaKnown RBP15.87■□□□□ 0.13
COMMD4-223ENST00000568301 SLC6A14Q9UN76 642 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 FRMD4BQ9Y2L6 1034 aa15.87■□□□□ 0.13
COMMD4-223ENST00000568301 HHLA1C9JL84 531 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 NEDD8-MDP1E9PL57 170 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 TRIM24O15164 1050 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 HLA-DRAP01903 254 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 SERPINF2P08697 491 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 PLA2G4AP47712 749 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 PSEN1P49768 467 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 ATXN3P54252 364 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-223ENST00000568301 RPL6Q02878 288 aaKnown RBP15.86■□□□□ 0.13
COMMD4-223ENST00000568301 GFPT1Q06210 699 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-223ENST00000568301 ORC1Q13415 861 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 C1orf220Q5T0J3 134 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 CEP135Q66GS9 1140 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 CLEC20AQ6ZU45 233 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 RABEPKQ7Z6M1 372 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 MIB1Q86YT6 1006 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 CHPFQ8IZ52 775 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 HDDC3Q8N4P3 179 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 CHCHD4Q8N4Q1 142 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 OR2I1PQ8NGU4 316 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 CYFIP2Q96F07 1278 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 GABRG3Q99928 467 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 NT5C1AQ9BXI3 368 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 CAPN10Q9HC96 672 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 OSER1Q9NX31 292 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 CALCOCO1Q9P1Z2 691 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 DNMT3LQ9UJW3 386 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 TRAF3IP3Q9Y228 551 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 PCDHA5Q9Y5H7 936 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 PCDH15Q96QU1 1955 aa15.86■□□□□ 0.13
COMMD4-223ENST00000568301 FAM221BA6H8Z2 402 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 PRRT4C9JH25 899 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 GFRA2O00451 464 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 CALUO43852 315 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-223ENST00000568301 KIF20AO95235 890 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 HSP90AA1P07900 732 aaKnown RBP15.85■□□□□ 0.13
COMMD4-223ENST00000568301 CISD3P0C7P0 127 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 ACO1P21399 889 aaKnown RBP15.85■□□□□ 0.13
COMMD4-223ENST00000568301 CMA1P23946 247 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 ADORA2BP29275 332 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 PIK3CAP42336 1068 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 WASP42768 502 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 VAMP7P51809 220 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 DNM1Q05193 864 aaKnown RBP15.85■□□□□ 0.13
COMMD4-223ENST00000568301 ZNF33AQ06730 810 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 ENPEPQ07075 957 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 EGFLAMQ63HQ2 1017 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 SPOPLQ6IQ16 392 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 TPGS1Q6ZTW0 290 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 GPRIN1Q7Z2K8 1008 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 IPO4Q8TEX9 1081 aaKnown RBP15.85■□□□□ 0.13
COMMD4-223ENST00000568301 ACOX2Q99424 681 aa15.85■□□□□ 0.13
COMMD4-223ENST00000568301 IMPG2Q9BZV3 1241 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms