RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 GREM1O60565 184 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 RPP40O75818 363 aaKnown RBP5.03□□□□□ -1.6
CLK3-219ENST00000567805 KAT7O95251 611 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 FGFR1OPO95684 399 aaKnown RBP5.03□□□□□ -1.6
CLK3-219ENST00000567805 TBX18O95935 607 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 RETP07949 1114 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 PAEPP09466 180 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 SETSIPP0DME0 302 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 CCDC192P0DO97 292 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 IRF1P10914 325 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 RALAP11233 206 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 VDRP11473 427 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 TGM1P22735 817 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 HOXC13P31276 330 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 GRIA2P42262 883 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 TNFRSF4P43489 277 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 PLA2G4AP47712 749 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 SLC6A11P48066 632 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 PXNP49023 591 aaPredicted RBP5.03□□□□□ -1.6
CLK3-219ENST00000567805 DGKEP52429 567 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 BCAT1P54687 386 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 SEC13P55735 322 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 MARSP56192 900 aaKnown RBP5.03□□□□□ -1.6
CLK3-219ENST00000567805 COG7P83436 770 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 ARHGAP8P85298 464 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 FOXK2Q01167 660 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 LMNB2Q03252 620 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 BST2Q10589 180 aaKnown RBP5.03□□□□□ -1.6
CLK3-219ENST00000567805 SRSF5Q13243 272 aaKnown RBP5.03□□□□□ -1.6
CLK3-219ENST00000567805 DMC1Q14565 340 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 STILQ15468 1287 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 LPAL2Q16609 132 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 GOLGA7BQ2TAP0 167 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 ANO4Q32M45 955 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 SGO2Q562F6 1265 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 C2orf27AQ580R0 203 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 RAB41Q5JT25 222 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 C10orf120Q5SQS8 335 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 LY6G5CQ5SRR4 150 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 BTBD8Q5XKL5 378 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 NUDT18Q6ZVK8 323 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 HTR3DQ70Z44 454 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 CEP68Q76N32 757 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 ERMP1Q7Z2K6 904 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 CACNA2D4Q7Z3S7 1137 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 TRMT11Q7Z4G4 463 aaKnown RBP5.03□□□□□ -1.6
CLK3-219ENST00000567805 PIGZQ86VD9 579 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 C12orf40Q86WS4 652 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 TTC30AQ86WT1 665 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 TRIM59Q8IWR1 403 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 ETFBKMTQ8IXQ9 262 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 PPM1KQ8N3J5 372 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 PHTF2Q8N3S3 785 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 FAM160A2Q8N612 972 aaPredicted RBP5.03□□□□□ -1.6
CLK3-219ENST00000567805 UBR7Q8N806 425 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 RMDN1Q96DB5 314 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 LOXL4Q96JB6 756 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 ZC3H10Q96K80 434 aaKnown RBP5.03□□□□□ -1.6
CLK3-219ENST00000567805 NT5C1BQ96P26 610 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 HHIPQ96QV1 700 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 FAM117AQ9C073 453 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 NMUR1Q9HB89 426 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 ARHGEF4Q9NR80 690 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 DLL3Q9NYJ7 618 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 CHMP5Q9NZZ3 219 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 KIAA1468Q9P260 1216 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 WDR35Q9P2L0 1181 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 DEC1Q9P2X7 70 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 HESX1Q9UBX0 185 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 LSM7Q9UK45 103 aaKnown RBP5.03□□□□□ -1.6
CLK3-219ENST00000567805 TSPAN16Q9UKR8 245 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 MMP17Q9ULZ9 603 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 USP18Q9UMW8 372 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 ZNF510Q9Y2H8 683 aa5.03□□□□□ -1.6
CLK3-219ENST00000567805 EP300Q09472 2414 aaPredicted RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 WDFY3Q8IZQ1 3526 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 TBC1D3BA6NDS4 549 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 NEDD8-MDP1E9PL57 170 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 O00370 1275 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 MDM4O15151 490 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 CACNG3O60359 315 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 TULP3O75386 442 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 STC2O76061 302 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 ALDH1A2O94788 518 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 ZBED1O96006 694 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 AFPP02771 609 aaKnown RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 TYRP14679 529 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 CD19P15391 556 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 CHKAP35790 457 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 KIR2DL1P43626 348 aaPredicted RBP5.02□□□□□ -1.61
CLK3-219ENST00000567805 TKTL1P51854 596 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 YWHAGP61981 247 aaKnown RBP eCLIP5.02□□□□□ -1.61
CLK3-219ENST00000567805 FOXK1P85037 733 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 GCNT1Q02742 428 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 KDSRQ06136 332 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 PDE4CQ08493 712 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 SPEM2Q0P670 501 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 MESP2Q0VG99 397 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 KCNH2Q12809 1159 aa5.02□□□□□ -1.61
CLK3-219ENST00000567805 LRMPQ12912 555 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms