RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 CYP26B1Q9NR63 512 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 KRT84Q9NSB2 600 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 COL20A1Q9P218 1284 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 COQ6Q9Y2Z9 468 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 ZDHHC9Q9Y397 364 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 SAGE2PA6NJ88 616 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 SLC16A3O15427 465 aaKnown RBP6.17□□□□□ -1.42
CNOT1-211ENST00000567188 PHF2O75151 1096 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 CYP2C9P11712 490 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 ITIH2P19823 946 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 NCF2P19878 526 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-211ENST00000567188 IL32P24001 234 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 CCT3P49368 545 aaKnown RBP6.17□□□□□ -1.42
CNOT1-211ENST00000567188 USP46P62068 366 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 PSMC5P62195 406 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 ECM1Q16610 540 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 TMTC4Q5T4D3 741 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 NET1Q7Z628 596 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-211ENST00000567188 LPPQ93052 612 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 CIDECQ96AQ7 238 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-211ENST00000567188 KIF12Q96FN5 646 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 POP1Q99575 1024 aaKnown RBP6.17□□□□□ -1.42
CNOT1-211ENST00000567188 BTBD10Q9BSF8 475 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 MMTAG2Q9BU76 263 aaKnown RBP6.17□□□□□ -1.42
CNOT1-211ENST00000567188 CFLARO15519 480 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 CCL5P13501 91 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 ABL2P42684 1182 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 KCTD21Q4G0X4 260 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 TATDN1Q6P1N9 297 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 RBM43Q6ZSC3 357 aaKnown RBP6.17□□□□□ -1.42
CNOT1-211ENST00000567188 HSPH1Q92598 858 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 CDH19Q9H159 772 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 ANKZF1Q9H8Y5 726 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 HMX1Q9NP08 348 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-211ENST00000567188 AKAP7Q9P0M2 348 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-211ENST00000567188 CASTOR2A6NHX0 329 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 POMCP01189 267 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 SMIM10L2AP0DMW4 78 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 SMIM10L2BP0DMW5 78 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 LCP1P13796 627 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 CD19P15391 556 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 ARID5BQ14865 1188 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 GJB7Q6PEY0 223 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 FRMD5Q7Z6J6 570 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 RIOX2Q8IUF8 465 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 NDUFAF2Q8N183 169 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 MCPH1Q8NEM0 835 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 WDR48Q8TAF3 677 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 LRRC1Q9BTT6 524 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 MAF1Q9H063 256 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 BAIAP2Q9UQB8 552 aa6.17□□□□□ -1.42
CNOT1-211ENST00000567188 SSU72P8A0A1W2PR75 194 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 CHEK2O96017 543 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 CALCAP01258 141 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 KRT1P04264 644 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 ITGA2BP08514 1039 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 PABPC1P11940 636 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 OR1G1P47890 313 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 CYP27A1Q02318 531 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 KCNA10Q16322 511 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 HP1BP3Q5SSJ5 553 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 RNF43Q68DV7 783 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 CXCL17Q6UXB2 119 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 KIF2BQ8N4N8 673 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 SNX31Q8N9S9 440 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 SHCBP1Q8NEM2 672 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 AENQ8WTP8 325 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 MKL1Q969V6 931 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 PI4K2AQ9BTU6 479 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 CAB39LQ9H9S4 337 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 VPS45Q9NRW7 570 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 ING4Q9UNL4 249 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 A0A1B0GTH6 734 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 TMEM247A6NEH6 219 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 PDZK1P1A8MUH7 402 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 ZNF18P17022 549 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 ABCB4P21439 1286 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 CLK1P49759 484 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 USP11P51784 963 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 PUDPQ08623 228 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 ILF2Q12905 390 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 NIPAL1Q6NVV3 410 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 TRAPPC11Q7Z392 1133 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 UHMK1Q8TAS1 419 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 NAT14Q8WUY8 206 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 PNKPQ96T60 521 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 LRMDAQ9H2I8 198 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 ENTPD7Q9NQZ7 604 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 KLRG2A4D1S0 409 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 ABCE1P61221 599 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 KCNA1Q09470 495 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 ARMC4Q5T2S8 1044 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 CCDC28AQ8IWP9 274 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 PPM1KQ8N3J5 372 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 FAM167AQ96KS9 214 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 TSSK1BQ9BXA7 367 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 TEX12Q9BXU0 123 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 MROH8Q9H579 483 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 GPAMQ9HCL2 828 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 TXNRD2Q9NNW7 524 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms