RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 BBC3Q96PG8 261 aaPredicted RBP11.93□□□□□ -0.5
SPG7-216ENST00000567138 C7orf25Q9BPX7 421 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 ELOVL4Q9GZR5 314 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 CCSER2Q9H7U1 834 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 SPHK2Q9NRA0 654 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 PANK4Q9NVE7 773 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 DNAJC17Q9NVM6 304 aaKnown RBP11.93□□□□□ -0.5
SPG7-216ENST00000567138 RAXQ9Y2V3 346 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 BPTFQ12830 3046 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 SMG1Q96Q15 3661 aaKnown RBP11.93□□□□□ -0.5
SPG7-216ENST00000567138 KNL1Q8NG31 2342 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 CABIN1Q9Y6J0 2220 aa11.93□□□□□ -0.5
SPG7-216ENST00000567138 NDUFS2O75306 463 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 ZNF217O75362 1048 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 PTPN1P18031 435 aaKnown RBP11.92□□□□□ -0.5
SPG7-216ENST00000567138 GNL1P36915 607 aaPredicted RBP11.92□□□□□ -0.5
SPG7-216ENST00000567138 CUL4BQ13620 913 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 GRAMD4Q6IC98 578 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 CHPFQ8IZ52 775 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 NUP93Q8N1F7 819 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 PDZD8Q8NEN9 1154 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 TIGD1Q96MW7 591 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 B3GNT5Q9BYG0 378 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 TRIM9Q9C026 710 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 BLZF1Q9H2G9 400 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 CD248Q9HCU0 757 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 GMIPQ9P107 970 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 CELSR3Q9NYQ7 3312 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 MEI4A8MW99 385 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 NEDD8-MDP1E9PL57 170 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 ZBTB24O43167 697 aaPredicted RBP11.92□□□□□ -0.5
SPG7-216ENST00000567138 RTN3O95197 1032 aaPredicted RBP11.92□□□□□ -0.5
SPG7-216ENST00000567138 ASIC1P78348 528 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 SLC14A1Q13336 389 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 DUOXA2Q1HG44 320 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 PREPLQ4J6C6 727 aaPredicted RBP11.92□□□□□ -0.5
SPG7-216ENST00000567138 HECTD3Q5T447 861 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 CNNM4Q6P4Q7 775 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 TOGARAM2Q6ZUX3 1019 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 NUDT18Q6ZVK8 323 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 SLCO6A1Q86UG4 719 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 CCDC65Q8IXS2 484 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 ZCCHC9Q8N567 271 aaKnown RBP11.92□□□□□ -0.5
SPG7-216ENST00000567138 B3GALNT2Q8NCR0 500 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 GLIS3Q8NEA6 775 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 SCAMP5Q8TAC9 235 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 LRIG1Q96JA1 1093 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 FAM124BQ9H5Z6 455 aaPredicted RBP11.92□□□□□ -0.5
SPG7-216ENST00000567138 CACNA2D2Q9NY47 1150 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 SUSD2Q9UGT4 822 aa11.92□□□□□ -0.5
SPG7-216ENST00000567138 CHORDC1Q9UHD1 332 aaPredicted RBP11.92□□□□□ -0.5
SPG7-216ENST00000567138 APOBEC2Q9Y235 224 aaKnown RBP11.92□□□□□ -0.5
SPG7-216ENST00000567138 ASXL3Q9C0F0 2248 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 ZNF233A6NK53 670 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 PRRT4C9JH25 899 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 KIAA0391O15091 583 aaKnown RBP11.91□□□□□ -0.5
SPG7-216ENST00000567138 TACC1O75410 805 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 DLATP10515 647 aaKnown RBP11.91□□□□□ -0.5
SPG7-216ENST00000567138 GNSP15586 552 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 SLC5A3P53794 718 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 TNNC1P63316 161 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 SYCP2LQ5T4T6 812 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 SDE2Q6IQ49 451 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 TPGS1Q6ZTW0 290 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 TRAPPC11Q7Z392 1133 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 FAM35AQ86V20 835 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 MARCH9Q86YJ5 346 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 WDR49Q8IV35 697 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 GPT2Q8TD30 523 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 SCFD1Q8WVM8 642 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 OVCA2Q8WZ82 227 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 CCDC34Q96HJ3 373 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 ZNF419Q96HQ0 510 aaPredicted RBP11.91□□□□□ -0.5
SPG7-216ENST00000567138 MRGPRX1Q96LB2 322 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 KCNK16Q96T55 309 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 GABRG3Q99928 467 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 MED10Q9BTT4 135 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 NACA2Q9H009 215 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 IL21RQ9HBE5 538 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 HSPBP1Q9NZL4 362 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 PCOLCE2Q9UKZ9 415 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 STARD13Q9Y3M8 1113 aa11.91□□□□□ -0.5
SPG7-216ENST00000567138 HELZ2Q9BYK8 2649 aaKnown RBP11.9□□□□□ -0.5
SPG7-216ENST00000567138 MUC22E2RYF6 1773 aaPredicted RBP11.9□□□□□ -0.5
SPG7-216ENST00000567138 PVALEFA0A1B0GWK0 134 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 A8MXQ7 604 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 GPR37O15354 613 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 CACNG3O60359 315 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 CBFA2T3O75081 653 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 CST3P01034 146 aaPredicted RBP11.9□□□□□ -0.5
SPG7-216ENST00000567138 MYL1P05976 194 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 TYRP14679 529 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 PGFP49763 221 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 DPYDQ12882 1025 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 PNOCQ13519 176 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 SURF1Q15526 300 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 WDR72Q3MJ13 1102 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 WDR45BQ5MNZ6 344 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 STXBP4Q6ZWJ1 553 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 RDH13Q8NBN7 331 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms