RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 ARCQ7LC44 396 aa17.51■□□□□ 0.39
CLN6-208ENST00000567060 DDX42Q86XP3 938 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLN6-208ENST00000567060 CMTM8Q8IZV2 173 aa17.51■□□□□ 0.39
CLN6-208ENST00000567060 TC2NQ8N9U0 490 aa17.51■□□□□ 0.39
CLN6-208ENST00000567060 NUP210Q8TEM1 1887 aaPredicted RBP17.51■□□□□ 0.39
CLN6-208ENST00000567060 SMARCD2Q92925 531 aa17.51■□□□□ 0.39
CLN6-208ENST00000567060 TRIM11Q96F44 468 aa17.51■□□□□ 0.39
CLN6-208ENST00000567060 SLITRK6Q9H5Y7 841 aa17.51■□□□□ 0.39
CLN6-208ENST00000567060 TBC1D17Q9HA65 648 aa17.51■□□□□ 0.39
CLN6-208ENST00000567060 SEPT11Q9NVA2 429 aaKnown RBP17.51■□□□□ 0.39
CLN6-208ENST00000567060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLN6-208ENST00000567060 CACNA1IQ9P0X4 2223 aa17.51■□□□□ 0.39
CLN6-208ENST00000567060 PAPSS1O43252 624 aaPredicted RBP17.5■□□□□ 0.39
CLN6-208ENST00000567060 SP9P0CG40 484 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 SRFP11831 508 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 ADKP55263 362 aaKnown RBP17.5■□□□□ 0.39
CLN6-208ENST00000567060 SLC7A9P82251 487 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 GSE1Q14687 1217 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 BTBD8Q5XKL5 378 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 SLC26A9Q7LBE3 791 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 DGLUCYQ7Z3D6 616 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 DCLK2Q8N568 766 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 SLC30A5Q8TAD4 765 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 ASB16Q96NS5 453 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 PCDHB18PQ96TA0 734 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 RRN3Q9NYV6 651 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 ARHGAP20Q9P2F6 1191 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 CHORDC1Q9UHD1 332 aaPredicted RBP17.5■□□□□ 0.39
CLN6-208ENST00000567060 NAGPAQ9UK23 515 aa17.5■□□□□ 0.39
CLN6-208ENST00000567060 A0A1W2PQH9 124 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 ANHXE9PGG2 379 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 TLR5O60602 858 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 HSF2BPO75031 334 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 RTN2O75298 545 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 ECI2O75521 394 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 GABBR2O75899 941 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 LTFP02788 710 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 MYBL1P10243 752 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 SKILP12757 684 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 GLULP15104 373 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 HDCP19113 662 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 FECHP22830 423 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 ATP5C1P36542 298 aaKnown RBP17.49■□□□□ 0.39
CLN6-208ENST00000567060 CYP4F8P98187 520 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 SLC6A3Q01959 620 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 BSPRYQ5W0U4 402 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 WDR59Q6PJI9 974 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 BHLHA9Q7RTU4 235 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 SCD5Q86SK9 330 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 SCUBE3Q8IX30 993 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 CELF5Q8N6W0 485 aaKnown RBP17.49■□□□□ 0.39
CLN6-208ENST00000567060 MAB21L3Q8N8X9 362 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 ZSCAN18Q8TBC5 510 aaPredicted RBP17.49■□□□□ 0.39
CLN6-208ENST00000567060 CPA5Q8WXQ8 436 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 ING5Q8WYH8 240 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 MCRS1Q96EZ8 462 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 SLC46A2Q9BY10 475 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 DEF6Q9H4E7 631 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 POPDC2Q9HBU9 364 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 ZFP14Q9HCL3 533 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 ADAM22Q9P0K1 906 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 DNMT3LQ9UJW3 386 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 ARHGAP26Q9UNA1 814 aa17.49■□□□□ 0.39
CLN6-208ENST00000567060 EPG5Q9HCE0 2579 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 YJEFN3A6XGL0 299 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 E7ENQ6 273 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 DDX3XO00571 662 aaKnown RBP eCLIP17.48■□□□□ 0.392e-13■■■□□ 16.8
CLN6-208ENST00000567060 ABL1P00519 1130 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 ERBB2P04626 1255 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 CKMP06732 381 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 RARGP13631 454 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 GJA1P17302 382 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 KPNA1P52294 538 aaPredicted RBP17.48■□□□□ 0.39
CLN6-208ENST00000567060 YWHAZP63104 245 aaKnown RBP17.48■□□□□ 0.39
CLN6-208ENST00000567060 GOLGA8FQ08AF8 430 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 GOLGA8DPQ0D2H9 430 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 SLC18A3Q16572 532 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 TXNDC8Q6A555 127 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 MSANTD2Q6P1R3 559 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 OLFML1Q6UWY5 402 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 MON1BQ7L1V2 547 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 C1orf210Q8IVY1 113 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 CCDC170Q8IYT3 715 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 MAML2Q8IZL2 1156 aaPredicted RBP17.48■□□□□ 0.39
CLN6-208ENST00000567060 ST13P5Q8NFI4 369 aaPredicted RBP17.48■□□□□ 0.39
CLN6-208ENST00000567060 OLIG1Q8TAK6 271 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 RNF139Q8WU17 664 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 DEPDC1BQ8WUY9 529 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 ELSPBP1Q96BH3 223 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 CCDC42Q96M95 316 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 NACA2Q9H009 215 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 ISCUQ9H1K1 167 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 NMUR1Q9HB89 426 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 TDP1Q9NUW8 608 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 DLL3Q9NYJ7 618 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 ADAMTS1Q9UHI8 967 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 SIT1Q9Y3P8 196 aa17.48■□□□□ 0.39
CLN6-208ENST00000567060 DPYSL4O14531 572 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 COG7P83436 770 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 PTP4A2Q12974 167 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms