RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 EIF4EBP2Q13542 120 aaPredicted RBP9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 IKBKEQ14164 716 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 NOMO1Q15155 1222 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 PPP1R7Q15435 360 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 TRADDQ15628 312 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 CCDC142Q17RM4 750 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 TCTN1Q2MV58 587 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 SMTNL2Q2TAL5 461 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 FAM153CQ494X1 144 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 KCNT1Q5JUK3 1230 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 SH3PXD2AQ5TCZ1 1133 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 OTUD1Q5VV17 481 aaPredicted RBP9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 C4orf22Q6V702 233 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 ZNF365Q70YC5 407 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 CROCCP2Q86T23 111 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 DDX42Q86XP3 938 aaKnown RBP eCLIP9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 SPATA2LQ8IUW3 424 aaPredicted RBP9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 DNAJC5GQ8N7S2 189 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 ACTL9Q8TC94 416 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 SPPL2BQ8TCT7 592 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 ATG4AQ8WYN0 398 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 RTP4Q96DX8 246 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 ULBP1Q9BZM6 244 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 C11orf49Q9H6J7 331 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 TMEM30AQ9NV96 361 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 TMLHEQ9NVH6 421 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 MARCH5Q9NX47 278 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 MTMR10Q9NXD2 777 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 HSFX1Q9UBD0 423 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 PCSK1NQ9UHG2 260 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 FAM153AQ9UHL3 310 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 DNPEPQ9ULA0 475 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 FZD10Q9ULW2 581 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 FAN1Q9Y2M0 1017 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 SNX24Q9Y343 169 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 RAD54BQ9Y620 910 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 VWA8A3KMH1 1905 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 SCN5AQ14524 2016 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 PLXNA3P51805 1871 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 GOLGA6BA6NDN3 693 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 PIK3R2O00459 728 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 TP73O15350 636 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 DGKIO75912 1065 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 IGLV3-25P01717 112 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 KRT14P02533 472 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 NUDT17P0C025 328 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 RARGP13631 454 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 ATF2P15336 505 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 BDNFP23560 247 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 HTR7P34969 479 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 SLC11A1P49279 550 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 NDUFV1P49821 464 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 SULT1E1P49888 294 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 CACNA2D1P54289 1103 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 EIF3BP55884 814 aaKnown RBP9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 ATP11AP98196 1134 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 OTUD4Q01804 1114 aaKnown RBP9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 GPR17Q13304 367 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 KRT81Q14533 505 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 HSP90B2PQ58FF3 399 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 ANKRD20A8PQ5CZ79 823 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 VARS2Q5ST30 1063 aaKnown RBP9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 FUT10Q6P4F1 479 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 ANKS3Q6ZW76 656 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 BZW1Q7L1Q6 419 aaKnown RBP9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 PCGF5Q86SE9 256 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 RFX6Q8HWS3 928 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 ARHGAP18Q8N392 663 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 PLD5Q8N7P1 536 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 TSEN2Q8NCE0 465 aaKnown RBP9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 FBXO25Q8TCJ0 367 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 PTCD2Q8WV60 388 aaKnown RBP9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 HSPH1Q92598 858 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 FAM149B1Q96BN6 582 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 VWCEQ96DN2 955 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 SCLYQ96I15 445 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 KCNK16Q96T55 309 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 TMEM109Q9BVC6 243 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 MAK16Q9BXY0 300 aaKnown RBP9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 ADAM33Q9BZ11 813 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 DPH5Q9H2P9 285 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 RC3H2Q9HBD1 1191 aaKnown RBP9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 KLHL11Q9NVR0 708 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 DNAJB4Q9UDY4 337 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 STK39Q9UEW8 545 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 ASIC3Q9UHC3 531 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 AP4E1Q9UPM8 1137 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 PCDHB5Q9Y5E4 795 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 BACE2Q9Y5Z0 518 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 COL4A6Q14031 1691 aa9.22□□□□□ -0.93
LSM3P5-201ENST00000566307 BCLAF3A2AJT9 711 aaKnown RBP9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 YJEFN3A6XGL0 299 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 TBKBP1A7MCY6 615 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 HACD1B0YJ81 288 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 GOLGA8KD6RF30 607 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 E7ENQ6 273 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 AGPSO00116 658 aa9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 DNALI1O14645 258 aaPredicted RBP9.21□□□□□ -0.94
LSM3P5-201ENST00000566307 APOL1O14791 398 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms