RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TCEAL3Q969E4 200 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 DHTKD1Q96HY7 919 aaPredicted RBP6.74□□□□□ -1.33
TCF4-228ENST00000565393 SPACA7Q96KW9 195 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 TIGD1Q96MW7 591 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 IPO9Q96P70 1041 aaKnown RBP6.74□□□□□ -1.33
TCF4-228ENST00000565393 ARID3AQ99856 593 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 DCLK3Q9C098 648 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 LRRC4Q9HBW1 653 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 METTL14Q9HCE5 456 aaKnown RBP6.74□□□□□ -1.33
TCF4-228ENST00000565393 PNPLA8Q9NP80 782 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 PLK2Q9NYY3 685 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 CLIC5Q9NZA1 410 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 ZNF510Q9Y2H8 683 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 USP3Q9Y6I4 520 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 SCN1AP35498 2009 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 TRIM49BA6NDI0 452 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 PRRT4C9JH25 899 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 BIN1O00499 593 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 PSMA7O14818 248 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 SLC16A3O15427 465 aaKnown RBP6.73□□□□□ -1.33
TCF4-228ENST00000565393 GREM1O60565 184 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 TSPAN3O60637 253 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 ADAM23O75077 832 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 STC2O76061 302 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 KLKB1P03952 638 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 CISD3P0C7P0 127 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 VDRP11473 427 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 LCP1P13796 627 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 HOXB2P14652 356 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 HNRNPLP14866 589 aaKnown RBP eCLIP6.73□□□□□ -1.33
TCF4-228ENST00000565393 BCKDHBP21953 392 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 CORO1AP31146 461 aaKnown RBP6.73□□□□□ -1.33
TCF4-228ENST00000565393 P2RY2P41231 377 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 HARS2P49590 506 aaKnown RBP6.73□□□□□ -1.33
TCF4-228ENST00000565393 MCCD1P59942 119 aaPredicted RBP6.73□□□□□ -1.33
TCF4-228ENST00000565393 IRX4P78413 519 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 RPL6Q02878 288 aaKnown RBP6.73□□□□□ -1.33
TCF4-228ENST00000565393 ARID5AQ03989 594 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 LRRC63Q05C16 580 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 PDE4CQ08493 712 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 CUL2Q13617 745 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 GOLGA7BQ2TAP0 167 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 UAP1L1Q3KQV9 507 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 DAB2IPQ5VWQ8 1189 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 EGFLAMQ63HQ2 1017 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 ARHGAP17Q68EM7 881 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 KLHDC10Q6PID8 442 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 TOGARAM2Q6ZUX3 1019 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 CYP2U1Q7Z449 544 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 DENND1CQ8IV53 801 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 ETFBKMTQ8IXQ9 262 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 SIX6OS1Q8N1H7 587 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 TERB1Q8NA31 727 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 DDI1Q8WTU0 396 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 EDEM1Q92611 657 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 ACOX2Q99424 681 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 MARCH2Q9P0N8 246 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 TSPAN16Q9UKR8 245 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 AGO1Q9UL18 857 aaKnown RBP6.73□□□□□ -1.33
TCF4-228ENST00000565393 KIAA1257Q9ULG3 409 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 STARD13Q9Y3M8 1113 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 PCDHB4Q9Y5E5 795 aa6.73□□□□□ -1.33
TCF4-228ENST00000565393 PDCD11Q14690 1871 aaKnown RBP6.73□□□□□ -1.33
TCF4-228ENST00000565393 TICRRQ7Z2Z1 1910 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 PATE3B3GLJ2 98 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 WASH3PC4AMC7 463 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 TULP2O00295 520 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 PIK3R2O00459 728 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 TM4SF5O14894 197 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 XPO1O14980 1071 aaKnown RBP6.72□□□□□ -1.33
TCF4-228ENST00000565393 AP5Z1O43299 807 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 TIMM44O43615 452 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 CACNG3O60359 315 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 SYNCRIPO60506 623 aaKnown RBP6.72□□□□□ -1.33
TCF4-228ENST00000565393 NDUFS2O75306 463 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 ZNF217O75362 1048 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 ADRB1P08588 477 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 CD44P16070 742 aaKnown RBP6.72□□□□□ -1.33
TCF4-228ENST00000565393 GABRG2P18507 467 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 TBXAS1P24557 533 aaPredicted RBP6.72□□□□□ -1.33
TCF4-228ENST00000565393 PPP1R2P41236 205 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 PTGER3P43115 390 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 FMO5P49326 533 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 LIMK1P53667 647 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 ATXN3P54252 364 aaPredicted RBP6.72□□□□□ -1.33
TCF4-228ENST00000565393 STX17P56962 302 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 BST2Q10589 180 aaKnown RBP6.72□□□□□ -1.33
TCF4-228ENST00000565393 CNGA2Q16280 664 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 COBLL1Q53SF7 1204 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 TRIM61Q5EBN2 209 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 RAB41Q5JT25 222 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 N4BP2L1Q5TBK1 243 aaPredicted RBP6.72□□□□□ -1.33
TCF4-228ENST00000565393 BSPRYQ5W0U4 402 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 LYSMD4Q5XG99 296 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 PMS2CLQ68D20 193 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 PM20D1Q6GTS8 502 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 TMEM270Q6UE05 265 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 KIAA1324Q6UXG2 1013 aaKnown RBP6.72□□□□□ -1.33
TCF4-228ENST00000565393 SLC36A4Q6YBV0 504 aa6.72□□□□□ -1.33
TCF4-228ENST00000565393 RRAGAQ7L523 313 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms