RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 SAP30LQ9HAJ7 183 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 TRIM36Q9NQ86 728 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 SNX15Q9NRS6 342 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 VPS45Q9NRW7 570 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 TMEM184CQ9NVA4 438 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 TRNAU1APQ9NX07 287 aaKnown RBP3.62□□□□□ -1.83
CHD9-211ENST00000564600 GAR1Q9NY12 217 aaKnown RBP3.62□□□□□ -1.83
CHD9-211ENST00000564600 TUBA8Q9NY65 449 aaPredicted RBP3.62□□□□□ -1.83
CHD9-211ENST00000564600 NKX1-2Q9UD57 310 aaPredicted RBP3.62□□□□□ -1.83
CHD9-211ENST00000564600 AFG3L2Q9Y4W6 797 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 SNX13Q9Y5W8 968 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 COL15A1P39059 1388 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.61□□□□□ -1.83
CHD9-211ENST00000564600 A8MVJ9 347 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 RRHO14718 337 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 PQBP1O60828 265 aaKnown RBP3.61□□□□□ -1.83
CHD9-211ENST00000564600 ANXA2P07355 339 aaKnown RBP3.61□□□□□ -1.83
CHD9-211ENST00000564600 CBSLP0DN79 551 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 TSHRP16473 764 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 RBL1P28749 1068 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 ATICP31939 592 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 GALNSP34059 522 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 THBS4P35443 961 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 CBSP35520 551 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 PBX1P40424 430 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 MMP13P45452 471 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 EIF4A1P60842 406 aaKnown RBP3.61□□□□□ -1.83
CHD9-211ENST00000564600 DAG1Q14118 895 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 TRIP6Q15654 476 aaKnown RBP3.61□□□□□ -1.83
CHD9-211ENST00000564600 TFAP2DQ7Z6R9 452 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 C12orf76Q8N812 135 aaPredicted RBP3.61□□□□□ -1.83
CHD9-211ENST00000564600 PNPLA1Q8N8W4 532 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 COQ8BQ96D53 544 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 LRRC46Q96FV0 321 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 HS6ST2Q96MM7 605 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 UNKQ9C0B0 810 aaKnown RBP3.61□□□□□ -1.83
CHD9-211ENST00000564600 NUP62CLQ9H1M0 184 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 SLC25A32Q9H2D1 315 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 USP29Q9HBJ7 922 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 STEAP1Q9UHE8 339 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 FZD4Q9ULV1 537 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 FAM50BQ9Y247 325 aa3.61□□□□□ -1.83
CHD9-211ENST00000564600 POM121BA6NF01 834 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 RHPN2P1A8MT19 583 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 IL18RAPO95256 599 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 PRF1P14222 555 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 ADRA1DP25100 572 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 NR4A2P43354 598 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 PRIM2P49643 509 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 POLGP54098 1239 aaPredicted RBP3.6□□□□□ -1.83
CHD9-211ENST00000564600 LINC00205P59089 165 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 RAE1P78406 368 aaKnown RBP3.6□□□□□ -1.83
CHD9-211ENST00000564600 CFHR1Q03591 330 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 KPNB1Q14974 876 aaKnown RBP3.6□□□□□ -1.83
CHD9-211ENST00000564600 ACOX1Q15067 660 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 TRIM71Q2Q1W2 868 aaKnown RBP3.6□□□□□ -1.83
CHD9-211ENST00000564600 AASDHQ4L235 1098 aaPredicted RBP3.6□□□□□ -1.83
CHD9-211ENST00000564600 C10orf25Q5T742 122 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 ABLIM2Q6H8Q1 611 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 SHC4Q6S5L8 630 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 CRTC1Q6UUV9 634 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 PIP4P1Q86T03 277 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 FSTL5Q8N475 847 aaPredicted RBP3.6□□□□□ -1.83
CHD9-211ENST00000564600 NANOGP1Q8N7R0 232 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 ATP11CQ8NB49 1132 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 MBD3L2Q8NHZ7 208 aaPredicted RBP3.6□□□□□ -1.83
CHD9-211ENST00000564600 SUN3Q8TAQ9 357 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 WIPF2Q8TF74 440 aaPredicted RBP3.6□□□□□ -1.83
CHD9-211ENST00000564600 ZDHHC12Q96GR4 267 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 ZNF668Q96K58 619 aaPredicted RBP3.6□□□□□ -1.83
CHD9-211ENST00000564600 FAM227BQ96M60 508 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 SIGLEC11Q96RL6 698 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 FAM118BQ9BPY3 351 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 TM2D2Q9BX73 214 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 ADGRE3Q9BY15 652 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 SEMA5BQ9P283 1151 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 PCDHB2Q9Y5E7 798 aa3.6□□□□□ -1.83
CHD9-211ENST00000564600 APAF1O14727 1248 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 DSCR3O14972 297 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 SNX2O60749 519 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 WDR47O94967 919 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 INMTO95050 263 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 TMEM225BP0DP42 221 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 SNHG28P0DPA3 235 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 CD19P15391 556 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 FGFR2P21802 821 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 CASP5P51878 434 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 ZNF91Q05481 1191 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 GAB1Q13480 694 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 DNASE1L3Q13609 305 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 CLCA4Q14CN2 919 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 RBMS2Q15434 407 aaKnown RBP3.59□□□□□ -1.83
CHD9-211ENST00000564600 RAP1GAP2Q684P5 730 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 KIAA0408Q6ZU52 694 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 IRF2BP2Q7Z5L9 587 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 SAMD14Q8IZD0 417 aaPredicted RBP3.59□□□□□ -1.83
CHD9-211ENST00000564600 FAM71DQ8N9W8 422 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 PRSS3P2Q8NHM4 247 aa3.59□□□□□ -1.83
CHD9-211ENST00000564600 SMCR8Q8TEV9 937 aaPredicted RBP3.59□□□□□ -1.83
CHD9-211ENST00000564600 IQCDQ96DY2 449 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms