RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 SSH3Q8TE77 659 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 IPO4Q8TEX9 1081 aaKnown RBP6.54□□□□□ -1.36
CHD9-205ENST00000562785 PNISRQ8TF01 805 aaKnown RBP6.54□□□□□ -1.36
CHD9-205ENST00000562785 ZNF668Q96K58 619 aaPredicted RBP6.54□□□□□ -1.36
CHD9-205ENST00000562785 RMDN3Q96TC7 470 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 ZBTB26Q9HCK0 441 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 AGO4Q9HCK5 861 aaKnown RBP6.54□□□□□ -1.36
CHD9-205ENST00000562785 SERTAD3Q9UJW9 196 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 NUDCQ9Y266 331 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 HS3ST4Q9Y661 456 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 MORC2Q9Y6X9 1032 aaPredicted RBP6.54□□□□□ -1.36
CHD9-205ENST00000562785 FAM208AQ9UK61 1670 aaKnown RBP6.54□□□□□ -1.36
CHD9-205ENST00000562785 NFAT5O94916 1531 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 FLT4P35916 1363 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 LTN1O94822 1766 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 PXDNQ92626 1479 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 C1QTNF3-AMACRE9PGA6 284 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 RGS10O43665 173 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 CREB3O43889 395 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 SLC5A2P31639 672 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 SPARCL1Q14515 664 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 MAPKAPK3Q16644 382 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 PFKFB4Q16877 469 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 SLC5A9Q2M3M2 681 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 PTCHD3Q3KNS1 767 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 C4orf46Q504U0 113 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 FAXCQ5TGI0 409 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 USP49Q70CQ1 688 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 GPR149Q86SP6 731 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 CACNA2D3Q8IZS8 1091 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 LNX2Q8N448 690 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 SLC30A5Q8TAD4 765 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 ATG4AQ8WYN0 398 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 FAM227BQ96M60 508 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 ACTRT3Q9BYD9 372 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 TPSD1Q9BZJ3 242 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 PCDHAC1Q9H158 963 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 PNNQ9H307 717 aaKnown RBP6.53□□□□□ -1.36
CHD9-205ENST00000562785 GBA2Q9HCG7 927 aaPredicted RBP6.53□□□□□ -1.36
CHD9-205ENST00000562785 OBP2BQ9NPH6 170 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 IGSF9Q9P2J2 1179 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 VPS51Q9UID3 782 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 ZMYND8Q9ULU4 1186 aaPredicted RBP6.53□□□□□ -1.36
CHD9-205ENST00000562785 HPSEQ9Y251 543 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 AHDC1Q5TGY3 1603 aaPredicted RBP6.53□□□□□ -1.36
CHD9-205ENST00000562785 PNPLA6Q8IY17 1366 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 CRYBG1Q9Y4K1 1723 aa6.53□□□□□ -1.36
CHD9-205ENST00000562785 LGALS16A8MUM7 142 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 PROM1O43490 865 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 TNNT2P45379 298 aaPredicted RBP6.52□□□□□ -1.37
CHD9-205ENST00000562785 BCAT1P54687 386 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 CCNIQ14094 377 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 PTK2BQ14289 1009 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.52□□□□□ -1.37
CHD9-205ENST00000562785 RAP1GAP2Q684P5 730 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 KCNH5Q8NCM2 988 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 B3GALNT2Q8NCR0 500 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 FAM71BQ8TC56 605 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 TMEM171Q8WVE6 324 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 LPIN2Q92539 896 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 HAS1Q92839 578 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 ZNF503Q96F45 646 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 ZDHHC12Q96GR4 267 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 SLC25A32Q9H2D1 315 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 TBCCD1Q9NVR7 557 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 DNAJB11Q9UBS4 358 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 CA14Q9ULX7 337 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 RGPD1P0DJD0 1748 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 ABCA3Q99758 1704 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 PEAK1Q9H792 1746 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 ROBO1Q9Y6N7 1651 aa6.52□□□□□ -1.37
CHD9-205ENST00000562785 MAP2P11137 1827 aaKnown RBP6.51□□□□□ -1.37
CHD9-205ENST00000562785 AQP12BA6NM10 295 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 COQ9O75208 318 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 ITGA5P08648 1049 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 ADORA2AP29274 412 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 SERPINF1P36955 418 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 MTHFSP49914 203 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 TIAL1Q01085 375 aaKnown RBP eCLIP6.51□□□□□ -1.37
CHD9-205ENST00000562785 ITIH3Q06033 890 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 FOXO1Q12778 655 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 TUBA3CQ13748 450 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 SF3B3Q15393 1217 aaKnown RBP6.51□□□□□ -1.37
CHD9-205ENST00000562785 TMEM95Q3KNT9 176 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 CCDC184Q52MB2 194 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 MIIPQ5JXC2 388 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 TMTC4Q5T4D3 741 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 TUBA3EQ6PEY2 450 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 ABRAQ8N0Z2 381 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 MYCT1Q8N699 235 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 SPATA5Q8NB90 893 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 OSCP1Q8WVF1 389 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 ASB10Q8WXI3 467 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 PTCD3Q96EY7 689 aaKnown RBP6.51□□□□□ -1.37
CHD9-205ENST00000562785 ZCWPW1Q9H0M4 648 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 NRDE2Q9H7Z3 1164 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 SNX14Q9Y5W7 946 aa6.51□□□□□ -1.37
CHD9-205ENST00000562785 MAPK8IP3Q9UPT6 1336 aa6.5□□□□□ -1.37
CHD9-205ENST00000562785 CAMTA1Q9Y6Y1 1673 aa6.5□□□□□ -1.37
CHD9-205ENST00000562785 PLEKHG2Q9H7P9 1386 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms