RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 DHFR2Q86XF0 187 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 CAPSLQ8WWF8 208 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 MTMR12Q9C0I1 747 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 NFKBIL1Q9UBC1 381 aaPredicted RBP10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 STK39Q9UEW8 545 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 MKL2Q9ULH7 1088 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 DDX3XO00571 662 aaKnown RBP eCLIP10.5□□□□□ -0.731e-9■□□□□ 10.2
GTF3C1-202ENST00000561623 SOAT2O75908 522 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 FAM86B2P0C5J1 330 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 SLC25A3Q00325 362 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 KYAT1Q16773 422 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 EFL1Q7Z2Z2 1120 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 ZBTB46Q86UZ6 589 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 BHLHE22Q8NFJ8 381 aaPredicted RBP10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 GORASP1Q9BQQ3 440 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 FRMD8P1Q9BZ68 369 aaPredicted RBP10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 CHST7Q9NS84 486 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 HECW2Q9P2P5 1572 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 TULP4Q9NRJ4 1543 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 FAM237BA0A1B0GVD1 139 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 A8MUI8 341 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 INPP4BO15327 924 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 TIMM44O43615 452 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 PQBP1O60828 265 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 HMGCS2P54868 508 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 PGS1Q32NB8 556 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 Q4G0T1 1027 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 MAP1SQ66K74 1059 aaPredicted RBP10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 SYTL1Q8IYJ3 562 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 MTFR1LQ9H019 292 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 USP18Q9UMW8 372 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 EIF3LQ9Y262 564 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 ABCA8O94911 1581 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 PTGES3LE9PB15 166 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 CES2O00748 559 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 TOMM70O94826 608 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 SNRPFP62306 86 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 PPATQ06203 517 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 MEA1Q16626 185 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 OR6J1Q8NGC5 347 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 BLOC1S5Q8TDH9 187 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 FAM172AQ8WUF8 416 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 DGCR6LQ9BY27 220 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 ATAD3AQ9NVI7 634 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 COPG2Q9UBF2 871 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 M0QYT0 321 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 ZMPSTE24O75844 475 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 ROR2Q01974 943 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 VAC14Q08AM6 782 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 TAF5Q15542 800 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 ANGEL2Q5VTE6 544 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 OLFML1Q6UWY5 402 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 ADCK2Q7Z695 626 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 CHSY1Q86X52 802 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 FIG4Q92562 907 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 TRIM62Q9BVG3 475 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 DNAJC18Q9H819 358 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 THAP1Q9NVV9 213 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 UBP1Q9NZI7 540 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 MPP6Q9NZW5 540 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 CLCA2Q9UQC9 943 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 SALL3Q9BXA9 1300 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 WDR27A2RRH5 827 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 SERPINE1P05121 402 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 TWF1Q12792 350 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 CRELD2Q6UXH1 353 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 CD302Q8IX05 232 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 WWOXQ9NZC7 414 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 RGS2P41220 211 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 ALDH1A3P47895 512 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 PDK3Q15120 406 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 RBM44Q6ZP01 1051 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 LINC00523Q86TU6 105 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 KBTBD2Q8IY47 623 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 RGL4Q8IZJ4 473 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 UBASH3BQ8TF42 649 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 TMEM165Q9HC07 324 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 PCDH9Q9HC56 1237 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 CORO1CQ9ULV4 474 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 NR3C2P08235 984 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 ZSCAN5DPP0CG00 497 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 TXNP10599 105 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 AUHQ13825 339 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 POLD3Q15054 466 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 PAN2Q504Q3 1202 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 CDC42EP5Q6NZY7 148 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 ATG16L2Q8NAA4 619 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 SH3TC2Q8TF17 1288 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 CENPTQ96BT3 561 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 PHF21BQ96EK2 531 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 LRRC40Q9H9A6 602 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 VTA1Q9NP79 307 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 CHKBQ9Y259 395 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 TAF4O00268 1085 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 IL18RAPO95256 599 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 DPEP1P16444 411 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 PSMC6P62333 389 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms