RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 VDRP11473 427 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 HNRNPLP14866 589 aaKnown RBP eCLIP18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 GRIA2P42262 883 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 BST2Q10589 180 aaKnown RBP18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 KCNH2Q12809 1159 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 RSPO4Q2I0M5 234 aaPredicted RBP18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 EMC10Q5UCC4 262 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 ANO7Q6IWH7 933 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 Q6ZNB5 142 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 TPGS1Q6ZTW0 290 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 TADA2BQ86TJ2 420 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 GPR161Q8N6U8 529 aaKnown RBP18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 TRIML1Q8N9V2 468 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 TXNDC5Q8NBS9 432 aaKnown RBP18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 UBA3Q8TBC4 463 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 TFAP2BQ92481 460 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 NDRG1Q92597 394 aaKnown RBP18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 BHMTQ93088 406 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 BBS2Q9BXC9 721 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 SRRTQ9BXP5 876 aaKnown RBP18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 TPSD1Q9BZJ3 242 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 KIAA1468Q9P260 1216 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 LAMA1P25391 3075 aa18.06■□□□□ 0.48
CDC42BPB-208ENST00000561271 SGK1O00141 431 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 TYRP14679 529 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 BRD2P25440 801 aaKnown RBP18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 KIR2DL1P43626 348 aaPredicted RBP18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 PLA2G4AP47712 749 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 DGKEP52429 567 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 MARSP56192 900 aaKnown RBP18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 YWHAGP61981 247 aaKnown RBP eCLIP18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 MRPS21P82921 87 aaKnown RBP18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 LMNB2Q03252 620 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 CETN1Q12798 172 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 C10orf76Q5T2E6 689 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 TMEM92Q6UXU6 159 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 RSRC2Q7L4I2 434 aaKnown RBP18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 RRAGAQ7L523 313 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 BHLHA9Q7RTU4 235 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 ARHGAP18Q8N392 663 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 ZNF276Q8N554 614 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 TERB1Q8NA31 727 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 IL17RCQ8NAC3 791 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 CDK5RAP1Q96SZ6 601 aaKnown RBP18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 ZSWIM1Q9BR11 485 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 UBXN6Q9BZV1 441 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 LRRC4Q9HBW1 653 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 DNAJC17Q9NVM6 304 aaKnown RBP18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 DEC1Q9P2X7 70 aa18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.05■□□□□ 0.48
CDC42BPB-208ENST00000561271 RNF225M0QZC1 329 aaPredicted RBP18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 DCLK1O15075 740 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 P4HA2O15460 535 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 CACNG3O60359 315 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 GNA14O95837 355 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 ZBED1O96006 694 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 AFPP02771 609 aaKnown RBP18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 KLKB1P03952 638 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 PAEPP09466 180 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 SETSIPP0DME0 302 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 CRY1Q16526 586 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 GRAMD4Q6IC98 578 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 CACNA2D4Q7Z3S7 1137 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 RBBP8NLQ8NC74 664 aaPredicted RBP18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 MDGA1Q8NFP4 955 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 INTS2Q9H0H0 1204 aaKnown RBP18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 SEMA4GQ9NTN9 838 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 MARK1Q9P0L2 795 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 MARCH2Q9P0N8 246 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 EBF1Q9UH73 591 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 INVSQ9Y283 1065 aa18.04■□□□□ 0.48
CDC42BPB-208ENST00000561271 NCOR2Q9Y618 2525 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 A0A0A0MRY4 1105 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 TBC1D3BA6NDS4 549 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 M0QYV0 167 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 PIK3R2O00459 728 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 LRP3O75074 770 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 ADAM23O75077 832 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 CORO1AP31146 461 aaKnown RBP18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 TNFRSF4P43489 277 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 RGS7P49802 495 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 CCDC6Q16204 474 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 PKDCCQ504Y2 493 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 PM20D1Q6GTS8 502 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 RASSF3Q86WH2 238 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 SIX6OS1Q8N1H7 587 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 ZNF513Q8N8E2 541 aaPredicted RBP18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 P2RY11Q96G91 374 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 CNOT6LQ96LI5 555 aaKnown RBP18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 KREMEN1Q96MU8 473 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 IPO9Q96P70 1041 aaKnown RBP18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 DLL3Q9NYJ7 618 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 PLK2Q9NYY3 685 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 RWDD2AQ9UIY3 292 aa18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.03■□□□□ 0.48
CDC42BPB-208ENST00000561271 SLC12A8A0AV02 714 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 EPN2O95208 641 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 LCP1P13796 627 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 ZNF132P52740 706 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms