RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 PCDHA5Q9Y5H7 936 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 A0A0A0MRY4 1105 aa28.49■■■□□ 2.15
SNRPA1-215ENST00000561187 HMBSP08397 361 aa28.49■■■□□ 2.15
SNRPA1-215ENST00000561187 MXI1P50539 228 aa28.49■■■□□ 2.15
SNRPA1-215ENST00000561187 ZCWPW2Q504Y3 356 aa28.49■■■□□ 2.15
SNRPA1-215ENST00000561187 RASAL2Q9UJF2 1139 aa28.49■■■□□ 2.15
SNRPA1-215ENST00000561187 GIPC1O14908 333 aa28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 NOVA1P51513 510 aaKnown RBP28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 KIF11P52732 1056 aa28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 IRX4P78413 519 aa28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 PNOCQ13519 176 aa28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 MAP7D1Q3KQU3 841 aa28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 UAP1L1Q3KQV9 507 aa28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 KRT39Q6A163 491 aa28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 SCD5Q86SK9 330 aa28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 HEXIM2Q96MH2 286 aaKnown RBP28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 SCAND2PQ9GZW5 306 aaPredicted RBP28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 CALCOCO1Q9P1Z2 691 aa28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 DNMT3LQ9UJW3 386 aa28.48■■■□□ 2.15
SNRPA1-215ENST00000561187 A0A1W2PQ27 194 aa28.47■■■□□ 2.15
SNRPA1-215ENST00000561187 A0A1W2PQ64 194 aa28.47■■■□□ 2.15
SNRPA1-215ENST00000561187 A0A1W2PQD8 194 aa28.47■■■□□ 2.15
SNRPA1-215ENST00000561187 GABRG2P18507 467 aa28.47■■■□□ 2.15
SNRPA1-215ENST00000561187 DCAF17Q5H9S7 520 aaPredicted RBP28.47■■■□□ 2.15
SNRPA1-215ENST00000561187 TRMT11Q7Z4G4 463 aaKnown RBP28.47■■■□□ 2.15
SNRPA1-215ENST00000561187 CHPFQ8IZ52 775 aa28.47■■■□□ 2.15
SNRPA1-215ENST00000561187 XPO6Q96QU8 1125 aaKnown RBP28.47■■■□□ 2.15
SNRPA1-215ENST00000561187 TMEM9BQ9NQ34 198 aa28.47■■■□□ 2.15
SNRPA1-215ENST00000561187 FSCN3Q9NQT6 498 aa28.47■■■□□ 2.15
SNRPA1-215ENST00000561187 ANGPTL2Q9UKU9 493 aa28.47■■■□□ 2.15
SNRPA1-215ENST00000561187 RAD54BQ9Y620 910 aa28.47■■■□□ 2.15
SNRPA1-215ENST00000561187 PRRT4C9JH25 899 aa28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 CACNG3O60359 315 aa28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 PMLP29590 882 aa28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 MAPK8P45983 427 aa28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 PREPLQ4J6C6 727 aaPredicted RBP28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 TRIM61Q5EBN2 209 aa28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 NUDT18Q6ZVK8 323 aa28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 P2RY11Q96G91 374 aa28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 DUSP9Q99956 384 aaKnown RBP28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 DUSP16Q9BY84 665 aa28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 SLC6A17Q9H1V8 727 aa28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 TMEM74BQ9NUR3 256 aa28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 TNRC6BQ9UPQ9 1833 aaKnown RBP28.46■■■□□ 2.15
SNRPA1-215ENST00000561187 EPB41P11171 864 aaKnown RBP28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 NTSR1P30989 418 aa28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 EFEMP1Q12805 493 aa28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 ST3GAL2Q16842 350 aa28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 TCERG1LQ5VWI1 586 aa28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 DAB2IPQ5VWQ8 1189 aa28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 LYSMD4Q5XG99 296 aa28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 KIAA1211LQ6NV74 962 aa28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 ERCC4Q92889 916 aaPredicted RBP28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 PNPLA8Q9NP80 782 aa28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 CISHQ9NSE2 258 aa28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 CACNA2D2Q9NY47 1150 aa28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 ATP6V1DQ9Y5K8 247 aa28.45■■■□□ 2.14
SNRPA1-215ENST00000561187 STC2O76061 302 aa28.44■■■□□ 2.14
SNRPA1-215ENST00000561187 ITPKAP23677 461 aa28.44■■■□□ 2.14
SNRPA1-215ENST00000561187 DGKGP49619 791 aa28.44■■■□□ 2.14
SNRPA1-215ENST00000561187 RPL6Q02878 288 aaKnown RBP28.44■■■□□ 2.14
SNRPA1-215ENST00000561187 Q6ZNB5 142 aa28.44■■■□□ 2.14
SNRPA1-215ENST00000561187 CCDC186Q7Z3E2 898 aa28.44■■■□□ 2.14
SNRPA1-215ENST00000561187 SLC4A11Q8NBS3 891 aa28.44■■■□□ 2.14
SNRPA1-215ENST00000561187 FBXL13Q8NEE6 735 aa28.44■■■□□ 2.14
SNRPA1-215ENST00000561187 TATDN2Q93075 761 aa28.44■■■□□ 2.14
SNRPA1-215ENST00000561187 CD93Q9NPY3 652 aa28.44■■■□□ 2.14
SNRPA1-215ENST00000561187 WDR35Q9P2L0 1181 aa28.44■■■□□ 2.14
SNRPA1-215ENST00000561187 PLXND1Q9Y4D7 1925 aa28.43■■■□□ 2.14
SNRPA1-215ENST00000561187 KMT2BQ9UMN6 2715 aaPredicted RBP28.43■■■□□ 2.14
SNRPA1-215ENST00000561187 A0A1W2PQF6 199 aa28.43■■■□□ 2.14
SNRPA1-215ENST00000561187 CDX4O14627 284 aaPredicted RBP28.43■■■□□ 2.14
SNRPA1-215ENST00000561187 RALAP11233 206 aa28.43■■■□□ 2.14
SNRPA1-215ENST00000561187 PLA2G4AP47712 749 aa28.43■■■□□ 2.14
SNRPA1-215ENST00000561187 EDRF1Q3B7T1 1238 aa28.43■■■□□ 2.14
SNRPA1-215ENST00000561187 SH3PXD2AQ5TCZ1 1133 aa28.43■■■□□ 2.14
SNRPA1-215ENST00000561187 RAB20Q9NX57 234 aa28.43■■■□□ 2.14
SNRPA1-215ENST00000561187 MARK1Q9P0L2 795 aa28.43■■■□□ 2.14
SNRPA1-215ENST00000561187 CYP8B1Q9UNU6 501 aa28.43■■■□□ 2.14
SNRPA1-215ENST00000561187 CEP295Q9C0D2 2601 aa28.43■■■□□ 2.14
SNRPA1-215ENST00000561187 CETN3O15182 167 aa28.42■■■□□ 2.14
SNRPA1-215ENST00000561187 CFIP05156 583 aa28.42■■■□□ 2.14
SNRPA1-215ENST00000561187 NDUFV2P19404 249 aa28.42■■■□□ 2.14
SNRPA1-215ENST00000561187 GTF2H1P32780 548 aa28.42■■■□□ 2.14
SNRPA1-215ENST00000561187 RAD23BP54727 409 aa28.42■■■□□ 2.14
SNRPA1-215ENST00000561187 ZNF252P-AS1Q0IIN9 211 aa28.42■■■□□ 2.14
SNRPA1-215ENST00000561187 CBWD6Q4V339 395 aa28.42■■■□□ 2.14
SNRPA1-215ENST00000561187 CBWD3Q5JTY5 395 aa28.42■■■□□ 2.14
SNRPA1-215ENST00000561187 CBWD5Q5RIA9 395 aa28.42■■■□□ 2.14
SNRPA1-215ENST00000561187 TMEM176AQ96HP8 235 aa28.42■■■□□ 2.14
SNRPA1-215ENST00000561187 DNAI2Q9GZS0 605 aa28.42■■■□□ 2.14
SNRPA1-215ENST00000561187 PI4KAP42356 2102 aa28.42■■■□□ 2.14
SNRPA1-215ENST00000561187 WASH3PC4AMC7 463 aa28.41■■■□□ 2.14
SNRPA1-215ENST00000561187 KLKB1P03952 638 aa28.41■■■□□ 2.14
SNRPA1-215ENST00000561187 CORO1AP31146 461 aaKnown RBP28.41■■■□□ 2.14
SNRPA1-215ENST00000561187 PRCPP42785 496 aa28.41■■■□□ 2.14
SNRPA1-215ENST00000561187 BYSLQ13895 437 aaKnown RBP28.41■■■□□ 2.14
SNRPA1-215ENST00000561187 GOLGA7BQ2TAP0 167 aa28.41■■■□□ 2.14
SNRPA1-215ENST00000561187 SDE2Q6IQ49 451 aa28.41■■■□□ 2.14
SNRPA1-215ENST00000561187 KLHDC10Q6PID8 442 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms