RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CCDC26Q8TAB7 109 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 ZNF606Q8WXB4 792 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 BHMTQ93088 406 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 FAM149B1Q96BN6 582 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 HSFY1Q96LI6 401 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 PCMTD1Q96MG8 357 aaPredicted RBP13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 PNKPQ96T60 521 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 LSM14BQ9BX40 385 aaKnown RBP13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 BBS2Q9BXC9 721 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 NAT10Q9H0A0 1025 aaKnown RBP13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 PDCL3Q9H2J4 239 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 PRMT8Q9NR22 394 aaPredicted RBP13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 ABCC13Q9NSE7 274 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 ZSCAN32Q9NX65 697 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 TMEM63CQ9P1W3 806 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 SLC8A2Q9UPR5 921 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 CNTN6Q9UQ52 1028 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 ATG2BQ96BY7 2078 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 BECN2A8MW95 431 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 STC2O76061 302 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 APODP05090 189 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 CORO1AP31146 461 aaKnown RBP13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 KRT9P35527 623 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 OPRD1P41143 372 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 ACADSBP45954 432 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 DAOAP59103 153 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 TYRO3Q06418 890 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 PREPLQ4J6C6 727 aaPredicted RBP13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 C2orf27AQ580R0 203 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 NUDT18Q6ZVK8 323 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 ZNF276Q8N554 614 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 CLEC4CQ8WTT0 213 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 SHC3Q92529 594 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 XPO6Q96QU8 1125 aaKnown RBP13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 HINFPQ9BQA5 517 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 FAM126AQ9BYI3 521 aaPredicted RBP13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 DCLK3Q9C098 648 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 SIX2Q9NPC8 291 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 ARHGEF4Q9NR80 690 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 SFMBT1Q9UHJ3 866 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 AJAP1Q9UKB5 411 aaPredicted RBP13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 PCDHGA2Q9Y5H1 932 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 CACNA1HO95180 2353 aa13.58□□□□□ -0.24
CTDSPL2-209ENST00000560620 MYOFQ9NZM1 2061 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 TBC1D3BA6NDS4 549 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 PROB1E7EW31 1015 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 FOXN3O00409 490 aaPredicted RBP13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 CAPN9O14815 690 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 FBXO21O94952 628 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 KAT7O95251 611 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 LTFP02788 710 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 PNMA6AP0CW24 399 aaPredicted RBP13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 GPD2P43304 727 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 KRT31Q15323 416 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 CDKAL1Q5VV42 579 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 PKN3Q6P5Z2 889 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 MAMSTRQ6ZN01 415 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 ASCL5Q7RTU5 278 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 C12orf40Q86WS4 652 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 DENND1CQ8IV53 801 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 PASD1Q8IV76 773 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 FMNL3Q8IVF7 1028 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 SCUBE3Q8IX30 993 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 AOPEPQ8N6M6 819 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 IRGQQ8WZA9 623 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 ACDQ96AP0 544 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 SEMA4AQ9H3S1 761 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 WDR35Q9P2L0 1181 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 DEC1Q9P2X7 70 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 ZNF510Q9Y2H8 683 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 CEP83Q9Y592 693 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 FHOD1Q9Y613 1164 aa13.57□□□□□ -0.24
CTDSPL2-209ENST00000560620 PRR23AA6NEV1 266 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 HOXC11O43248 304 aaPredicted RBP13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 SART1O43290 800 aaKnown RBP13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 LMNAP02545 664 aaKnown RBP13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 CYBBP04839 570 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 NCAM1P13591 858 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 TYRP14679 529 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 CHKAP35790 457 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 EIF2DP41214 584 aaKnown RBP13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 HARS2P49590 506 aaKnown RBP13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 BPIFB4P59827 614 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 KCNMA1Q12791 1236 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 DRAP1Q14919 205 aaPredicted RBP13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 GAB4Q2WGN9 574 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 ANO6Q4KMQ2 910 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 KLHDC7AQ5VTJ3 777 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 BHLHA9Q7RTU4 235 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 SLC47A2Q86VL8 602 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 SCML4Q8N228 414 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 PLD4Q96BZ4 506 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 NOX5Q96PH1 765 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 SYNCQ9H7C4 482 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 DNAJC17Q9NVM6 304 aaKnown RBP13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 C2orf42Q9NWW7 574 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 PLK2Q9NYY3 685 aa13.56□□□□□ -0.24
CTDSPL2-209ENST00000560620 VPS13AQ96RL7 3174 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms