RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 EIF3FO00303 357 aaPredicted RBP6.39□□□□□ -1.39
MARK3-220ENST00000560417 ESRRBO95718 433 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 CKMT1AP12532 417 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 MAKP20794 623 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 YY1P25490 414 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 ADRA1BP35368 520 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 MAPK9P45984 424 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 DGKQP52824 942 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 KRTAP10-2P60368 255 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 E2F1Q01094 437 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 DEUP1Q05D60 604 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 FOXI1Q12951 378 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 CUL4BQ13620 913 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 CCDC144NLQ6NUI1 221 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 PARS2Q7L3T8 475 aaKnown RBP6.39□□□□□ -1.39
MARK3-220ENST00000560417 WDR53Q7Z5U6 358 aaPredicted RBP6.39□□□□□ -1.39
MARK3-220ENST00000560417 OR4N4Q8N0Y3 316 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 SLC44A3Q8N4M1 653 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 SIMC1Q8NDZ2 872 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 SLC22A17Q8WUG5 538 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 RUBCNQ92622 972 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 TBATAQ96M53 351 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 TRAPPC9Q96Q05 1148 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 DPCDQ9BVM2 203 aaPredicted RBP6.39□□□□□ -1.39
MARK3-220ENST00000560417 KCNK9Q9NPC2 374 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 ARHGEF3Q9NR81 526 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 DUSP22Q9NRW4 184 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 DLL3Q9NYJ7 618 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 PDP2Q9P2J9 529 aa6.39□□□□□ -1.39
MARK3-220ENST00000560417 EFCAB8A8MWE9 144 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 M0QZQ0 153 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 PPP6R2O75170 966 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 ADRB1P08588 477 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 DLDP09622 509 aaKnown RBP6.38□□□□□ -1.39
MARK3-220ENST00000560417 ELFN1P0C7U0 828 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 DRD1P21728 446 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 ADRA1DP25100 572 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 GRIA3P42263 894 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 SEC24CP53992 1094 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 TPTEP56180 551 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 SUMO2P61956 95 aaKnown RBP6.38□□□□□ -1.39
MARK3-220ENST00000560417 MPP3Q13368 585 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 DNASE1L3Q13609 305 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 PLAC9Q5JTB6 97 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 LCE4AQ5TA78 99 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 PTCHD4Q6ZW05 846 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 PEG10Q86TG7 708 aaKnown RBP6.38□□□□□ -1.39
MARK3-220ENST00000560417 LRRC71Q8N4P6 559 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 THAP7Q9BT49 309 aaPredicted RBP6.38□□□□□ -1.39
MARK3-220ENST00000560417 MECRQ9BV79 373 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 ZNF747Q9BV97 191 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 G6PC2Q9NQR9 355 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 ASAP1Q9ULH1 1129 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 ZBTB1Q9Y2K1 713 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 SALL3Q9BXA9 1300 aa6.38□□□□□ -1.39
MARK3-220ENST00000560417 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 KIF28PB7ZC32 967 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 AP4M1O00189 453 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 URI1O94763 535 aaPredicted RBP6.37□□□□□ -1.39
MARK3-220ENST00000560417 TK1P04183 234 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 CREB1P16220 341 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 GSTM5P46439 218 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 AVPR1BP47901 424 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 PDE1AP54750 535 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 SMAD1Q15797 465 aaKnown RBP6.37□□□□□ -1.39
MARK3-220ENST00000560417 FAM110CQ1W6H9 321 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 ADCK5Q3MIX3 580 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 ANKRD16Q6P6B7 361 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 MTHFD1LQ6UB35 978 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 Q6ZPA2 131 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 RRAGAQ7L523 313 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 VRK3Q8IV63 474 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 SIRT6Q8N6T7 355 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 PNISRQ8TF01 805 aaKnown RBP6.37□□□□□ -1.39
MARK3-220ENST00000560417 HERVK_113Q902F9 699 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 USP13Q92995 863 aaPredicted RBP6.37□□□□□ -1.39
MARK3-220ENST00000560417 VPS50Q96JG6 964 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 PDLIM2Q96JY6 352 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 LENG8Q96PV6 779 aaPredicted RBP6.37□□□□□ -1.39
MARK3-220ENST00000560417 PYM1Q9BRP8 204 aaKnown RBP6.37□□□□□ -1.39
MARK3-220ENST00000560417 FSD1LQ9BXM9 530 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 MAF1Q9H063 256 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 TAF1DQ9H5J8 278 aaPredicted RBP6.37□□□□□ -1.39
MARK3-220ENST00000560417 ELAC1Q9H777 363 aaKnown RBP6.37□□□□□ -1.39
MARK3-220ENST00000560417 FOXJ2Q9P0K8 574 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 ZNF69Q9UC07 566 aa6.37□□□□□ -1.39
MARK3-220ENST00000560417 A0A1B0GVC2 190 aa6.36□□□□□ -1.39
MARK3-220ENST00000560417 CCDC151A5D8V7 595 aa6.36□□□□□ -1.39
MARK3-220ENST00000560417 FAM90A20PA6NIJ5 464 aa6.36□□□□□ -1.39
MARK3-220ENST00000560417 H0YIZ8 118 aa6.36□□□□□ -1.39
MARK3-220ENST00000560417 TMPRSS11DO60235 418 aa6.36□□□□□ -1.39
MARK3-220ENST00000560417 LARGE1O95461 756 aa6.36□□□□□ -1.39
MARK3-220ENST00000560417 PSG6Q00889 435 aa6.36□□□□□ -1.39
MARK3-220ENST00000560417 SF3A3Q12874 501 aaKnown RBP eCLIP6.36□□□□□ -1.39
MARK3-220ENST00000560417 SEMA3BQ13214 749 aa6.36□□□□□ -1.39
MARK3-220ENST00000560417 GALNTL6Q49A17 601 aa6.36□□□□□ -1.39
MARK3-220ENST00000560417 MMS22LQ6ZRQ5 1243 aa6.36□□□□□ -1.39
MARK3-220ENST00000560417 ANKS1BQ7Z6G8 1248 aa6.36□□□□□ -1.39
MARK3-220ENST00000560417 CPOQ8IVL8 374 aa6.36□□□□□ -1.39
MARK3-220ENST00000560417 ULK2Q8IYT8 1036 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms