RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 TUBGCP2Q9BSJ2 902 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 NDST4Q9H3R1 872 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 SPHK2Q9NRA0 654 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 APEX2Q9UBZ4 518 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 DACH1Q9UI36 760 aa12.22□□□□□ -0.45
RABGGTA-216ENST00000560243 KCNJ18B7U540 433 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 HOXC11O43248 304 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 LETM1O95202 739 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 LMNAP02545 664 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 PNMA6AP0CW24 399 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 USP8P40818 1118 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 MFAP3P55082 362 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 DAOAP59103 153 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 KCNJ12Q14500 433 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 ANO4Q32M45 955 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 VWA3BQ502W6 1294 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 C2orf27AQ580R0 203 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 EMC10Q5UCC4 262 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 BSPRYQ5W0U4 402 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 C11orf57Q6ZUT1 292 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 RSRC2Q7L4I2 434 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 FAM114A1Q8IWE2 563 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 ETFBKMTQ8IXQ9 262 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 SIX6OS1Q8N1H7 587 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 ARHGAP18Q8N392 663 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 PHTF2Q8N3S3 785 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 SHC3Q92529 594 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 BHMTQ93088 406 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 OTUB2Q96DC9 234 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 FAM126AQ9BYI3 521 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 SEMA4AQ9H3S1 761 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 ZDHHC4Q9NPG8 344 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 MARCH2Q9P0N8 246 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 CYTH4Q9UIA0 394 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 LSM7Q9UK45 103 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 NFE2L3Q9Y4A8 694 aa12.21□□□□□ -0.45
RABGGTA-216ENST00000560243 CEP250Q9BV73 2442 aa12.21□□□□□ -0.46
RABGGTA-216ENST00000560243 EML5Q05BV3 1969 aa12.21□□□□□ -0.46
RABGGTA-216ENST00000560243 SLC12A8A0AV02 714 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 GOLGA6L22H0YM25 854 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 THAP12O43422 761 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 HRO43593 1189 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 TULP3O75386 442 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 KAT7O95251 611 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 GPD2P43304 727 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 GAD2Q05329 585 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 GOLGA8FQ08AF8 430 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 GOLGA8DPQ0D2H9 430 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 KCNMA1Q12791 1236 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 PPP2R5DQ14738 602 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 STILQ15468 1287 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 LPAL2Q16609 132 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 FBXO43Q4G163 708 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 TCP11X2Q5H9J9 407 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 BTBD8Q5XKL5 378 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 TPGS1Q6ZTW0 290 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 ENOSF1Q7L5Y1 443 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 TADA2BQ86TJ2 420 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 SCUBE3Q8IX30 993 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 DCLK2Q8N568 766 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 CCDC33Q8N5R6 958 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 USP33Q8TEY7 942 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 ZNF606Q8WXB4 792 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 EXOC4Q96A65 974 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 HHIPQ96QV1 700 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 PNKPQ96T60 521 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 MIS12Q9H081 205 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 CNGB3Q9NQW8 809 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 ARHGEF4Q9NR80 690 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 TAB2Q9NYJ8 693 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 SFMBT1Q9UHJ3 866 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 DNAJC12Q9UKB3 198 aa12.2□□□□□ -0.46
RABGGTA-216ENST00000560243 NEDD8-MDP1E9PL57 170 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 FOXN3O00409 490 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 PES1O00541 588 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 MSI1O43347 362 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 ATG13O75143 517 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 HNRNPLP14866 589 aaKnown RBP eCLIP12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 GNA15P30679 374 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 CORO1AP31146 461 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 HOXA6P31267 233 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 EIF2DP41214 584 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 NRLP54845 237 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 COG7P83436 770 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 DMC1Q14565 340 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 CT47A1Q5JQC4 288 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 CDKAL1Q5VV42 579 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 DENND1CQ8IV53 801 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 FMNL3Q8IVF7 1028 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 SCML4Q8N228 414 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 WDTC1Q8N5D0 677 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 ALLCQ8N6M5 410 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 ENOX1Q8TC92 643 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 CDK5RAP1Q96SZ6 601 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 BBS2Q9BXC9 721 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 EPC1Q9H2F5 836 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 FANCLQ9NW38 375 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 PLK2Q9NYY3 685 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 TJP2Q9UDY2 1190 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms