RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ZNF292O60281 2723 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 CCDC163A0A0D9SF12 145 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 MDM4O15151 490 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 ATG13O75143 517 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 ADH5P11766 374 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 GAD2Q05329 585 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 GOLGA8FQ08AF8 430 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 GOLGA8DPQ0D2H9 430 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 MESP2Q0VG99 397 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 PPP2R5DQ14738 602 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 TRIP4Q15650 581 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-213ENST00000560175 CCDC183Q5T5S1 534 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 MSANTD2Q6P1R3 559 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 TSSK4Q6SA08 328 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 BEND5Q7L4P6 421 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 TMEM110Q86TL2 294 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 TMEM25Q86YD3 366 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 FAM217AQ8IXS0 508 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 FAM71AQ8IYT1 594 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 SUMF1Q8NBK3 374 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 TTC16Q8NEE8 873 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 CCDC26Q8TAB7 109 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 NAA15Q9BXJ9 866 aaKnown RBP13.85□□□□□ -0.19
SMAD3-213ENST00000560175 NACA2Q9H009 215 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 ABCC13Q9NSE7 274 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 OLA1Q9NTK5 396 aaKnown RBP13.85□□□□□ -0.19
SMAD3-213ENST00000560175 TMEM63CQ9P1W3 806 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 FBXO10Q9UK96 956 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 AJAP1Q9UKB5 411 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-213ENST00000560175 PCDHGC3Q9UN70 934 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 ZNF510Q9Y2H8 683 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 R4GN57 208 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 FRYLO94915 3013 aa13.85□□□□□ -0.19
SMAD3-213ENST00000560175 EP300Q09472 2414 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-213ENST00000560175 EML5Q05BV3 1969 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 M0QYV0 167 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 FOXN3O00409 490 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-213ENST00000560175 SCAMP3O14828 347 aaKnown RBP13.84□□□□□ -0.19
SMAD3-213ENST00000560175 MED7O43513 233 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 RNF40O75150 1001 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 FBXO21O94952 628 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 KRT5P13647 590 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 CLCN1P35523 988 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 SLC6A11P48066 632 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 NCAPHQ15003 741 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 KLHDC7AQ5VTJ3 777 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 SASS6Q6UVJ0 657 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 C11orf57Q6ZUT1 292 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-213ENST00000560175 SYT13Q7L8C5 426 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 C12orf40Q86WS4 652 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 WDTC1Q8N5D0 677 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 USP33Q8TEY7 942 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 PNKPQ96T60 521 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 DCLK3Q9C098 648 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 LHX5Q9H2C1 402 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 HSD3B7Q9H2F3 369 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 ACP6Q9NPH0 428 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 PLCB1Q9NQ66 1216 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 MARCH2Q9P0N8 246 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 CYTH4Q9UIA0 394 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 STOML2Q9UJZ1 356 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 LSM7Q9UK45 103 aaKnown RBP13.84□□□□□ -0.19
SMAD3-213ENST00000560175 DNAJC12Q9UKB3 198 aa13.84□□□□□ -0.19
SMAD3-213ENST00000560175 HBS1LQ9Y450 684 aaKnown RBP13.84□□□□□ -0.19
SMAD3-213ENST00000560175 GPR179Q6PRD1 2367 aa13.83□□□□□ -0.19
SMAD3-213ENST00000560175 GVINP1Q7Z2Y8 2422 aa13.83□□□□□ -0.19
SMAD3-213ENST00000560175 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-213ENST00000560175 GFRA2O00451 464 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 CACNG3O60359 315 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 GFRA3O60609 400 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 LETM1O95202 739 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-213ENST00000560175 LMNAP02545 664 aaKnown RBP13.83□□□□□ -0.2
SMAD3-213ENST00000560175 FYNP06241 537 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 IRF1P10914 325 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 ZNF18P17022 549 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 GNA15P30679 374 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 TNFRSF4P43489 277 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 KIR2DL1P43626 348 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-213ENST00000560175 ACADSBP45954 432 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 MRPS21P82921 87 aaKnown RBP13.83□□□□□ -0.2
SMAD3-213ENST00000560175 EFEMP1Q12805 493 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 STX1AQ16623 288 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 ARHGAP44Q17R89 818 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 HSP90AA4PQ58FG1 418 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 BTBD8Q5XKL5 378 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 DENND1BQ6P3S1 775 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 SIX6OS1Q8N1H7 587 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 CPXM2Q8N436 756 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 CAMKK1Q8N5S9 505 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 KCNV2Q8TDN2 545 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 ATRIPQ8WXE1 791 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 P2RY11Q96G91 374 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 EPC1Q9H2F5 836 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 FANCLQ9NW38 375 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 WDR35Q9P2L0 1181 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 STARD13Q9Y3M8 1113 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 CFAP54Q96N23 3096 aa13.83□□□□□ -0.2
SMAD3-213ENST00000560175 TULP3O75386 442 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 KAT7O95251 611 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 PENKP01210 267 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms