RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 INTS6LQ5JSJ4 861 aaKnown RBP21.7■■□□□ 1.06
PSEN1-225ENST00000560005 LMBRD2Q68DH5 695 aaPredicted RBP21.7■■□□□ 1.06
PSEN1-225ENST00000560005 HDDC3Q8N4P3 179 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 TC2NQ8N9U0 490 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 OR8K1Q8NGG5 319 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 ZNF830Q96NB3 372 aaPredicted RBP21.7■■□□□ 1.06
PSEN1-225ENST00000560005 ACBD6Q9BR61 282 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 PLCB1Q9NQ66 1216 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 ZNHIT6Q9NWK9 470 aaKnown RBP21.7■■□□□ 1.06
PSEN1-225ENST00000560005 BCCIPQ9P287 314 aaKnown RBP eCLIP21.7■■□□□ 1.06
PSEN1-225ENST00000560005 PILRBQ9UKJ0 227 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 GTF3C4Q9UKN8 822 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 AGO2Q9UKV8 859 aaKnown RBP21.7■■□□□ 1.06
PSEN1-225ENST00000560005 L1RE1Q9UN81 338 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 SIK3Q9Y2K2 1263 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 CELSR3Q9NYQ7 3312 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 ADAMTS20P59510 1910 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 FAM221BA6H8Z2 402 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 KLF8O95600 359 aaPredicted RBP21.69■■□□□ 1.06
PSEN1-225ENST00000560005 GYPCP04921 128 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 ITPKAP23677 461 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 RDXP35241 583 aaKnown RBP21.69■■□□□ 1.06
PSEN1-225ENST00000560005 TIE1P35590 1138 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 ZXDBP98169 803 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 EXOC3L4Q17RC7 722 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 MAP7D1Q3KQU3 841 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 C19orf48Q6RUI8 117 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 SCN4BQ8IWT1 228 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 IL17RCQ8NAC3 791 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 RDH13Q8NBN7 331 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 CPLX3Q8WVH0 158 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 PKMYT1Q99640 499 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 BAG1Q99933 345 aaPredicted RBP21.69■■□□□ 1.06
PSEN1-225ENST00000560005 IKZF4Q9H2S9 585 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 KCNF1Q9H3M0 494 aa21.69■■□□□ 1.06
PSEN1-225ENST00000560005 POLMQ9NP87 494 aaPredicted RBP21.69■■□□□ 1.06
PSEN1-225ENST00000560005 HELZP42694 1942 aaKnown RBP21.68■■□□□ 1.06
PSEN1-225ENST00000560005 ADAMTS9Q9P2N4 1935 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 TULP1O00294 542 aaPredicted RBP21.68■■□□□ 1.06
PSEN1-225ENST00000560005 CAPNS1P04632 268 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 CYP17A1P05093 508 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 KRT9P35527 623 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 PNPLA4P41247 253 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 DPP6P42658 865 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 SLC6A11P48066 632 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 FMO5P49326 533 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 ADKP55263 362 aaKnown RBP21.68■■□□□ 1.06
PSEN1-225ENST00000560005 MYL7Q01449 175 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 POU5F1Q01860 360 aaKnown RBP21.68■■□□□ 1.06
PSEN1-225ENST00000560005 MESP2Q0VG99 397 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 SURF1Q15526 300 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 PEAR1Q5VY43 1037 aaPredicted RBP21.68■■□□□ 1.06
PSEN1-225ENST00000560005 TMTC1Q8IUR5 882 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 SPATA2LQ8IUW3 424 aaPredicted RBP21.68■■□□□ 1.06
PSEN1-225ENST00000560005 HMGB4Q8WW32 186 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 ZDHHC4Q9NPG8 344 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 GPSM3Q9Y4H4 160 aa21.68■■□□□ 1.06
PSEN1-225ENST00000560005 LEFTY2O00292 366 aa21.67■■□□□ 1.06
PSEN1-225ENST00000560005 ARHGAP6O43182 974 aa21.67■■□□□ 1.06
PSEN1-225ENST00000560005 CCP110O43303 1012 aa21.67■■□□□ 1.06
PSEN1-225ENST00000560005 CHRM1P11229 460 aaPredicted RBP21.67■■□□□ 1.06
PSEN1-225ENST00000560005 POLR2BP30876 1174 aaKnown RBP21.67■■□□□ 1.06
PSEN1-225ENST00000560005 ARID5BQ14865 1188 aa21.67■■□□□ 1.06
PSEN1-225ENST00000560005 CFAP221Q4G0U5 840 aa21.67■■□□□ 1.06
PSEN1-225ENST00000560005 SPDYCQ5MJ68 293 aa21.67■■□□□ 1.06
PSEN1-225ENST00000560005 CRELD2Q6UXH1 353 aaPredicted RBP21.67■■□□□ 1.06
PSEN1-225ENST00000560005 FMNL3Q8IVF7 1028 aa21.67■■□□□ 1.06
PSEN1-225ENST00000560005 PGBD3Q8N328 593 aa21.67■■□□□ 1.06
PSEN1-225ENST00000560005 SPATA18Q8TC71 538 aa21.67■■□□□ 1.06
PSEN1-225ENST00000560005 SLC6A14Q9UN76 642 aa21.67■■□□□ 1.06
PSEN1-225ENST00000560005 HCRTO43612 131 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 OPHN1O60890 802 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 HUS1O60921 280 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 HOXD12P35452 270 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 PDE6CP51160 858 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 CCZ1BP86790 482 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 CCZ1P86791 482 aaPredicted RBP21.66■■□□□ 1.06
PSEN1-225ENST00000560005 GFPT1Q06210 699 aaPredicted RBP21.66■■□□□ 1.06
PSEN1-225ENST00000560005 KCNMA1Q12791 1236 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 LRMPQ12912 555 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 BYSLQ13895 437 aaKnown RBP21.66■■□□□ 1.06
PSEN1-225ENST00000560005 DUOXA1Q1HG43 343 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 SOWAHCQ53LP3 525 aaPredicted RBP21.66■■□□□ 1.06
PSEN1-225ENST00000560005 EOGTQ5NDL2 527 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 EMC10Q5UCC4 262 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 RAB44Q7Z6P3 723 aaPredicted RBP21.66■■□□□ 1.06
PSEN1-225ENST00000560005 OSTM1Q86WC4 334 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 DEFB119Q8N690 84 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 PNKPQ96T60 521 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 TTYH3Q9C0H2 523 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 AGAP1Q9UPQ3 857 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 PLXND1Q9Y4D7 1925 aa21.66■■□□□ 1.06
PSEN1-225ENST00000560005 TCRBV21S2A2A0A5A6 115 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 SCAMP3O14828 347 aaKnown RBP21.65■■□□□ 1.06
PSEN1-225ENST00000560005 ADAM23O75077 832 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 KAT7O95251 611 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 IL18RAPO95256 599 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 APODP05090 189 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 ITGB3P05106 788 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 AP3M2P53677 418 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms