RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 IPO4Q8TEX9 1081 aaKnown RBP12.13□□□□□ -0.47
TM2D3-208ENST00000559891 FAM149B1Q96BN6 582 aa12.13□□□□□ -0.47
TM2D3-208ENST00000559891 LRRC1Q9BTT6 524 aa12.13□□□□□ -0.47
TM2D3-208ENST00000559891 LMAN2LQ9H0V9 348 aa12.13□□□□□ -0.47
TM2D3-208ENST00000559891 GOLGA6AQ9NYA3 693 aa12.13□□□□□ -0.47
TM2D3-208ENST00000559891 TMEM59LQ9UK28 342 aa12.13□□□□□ -0.47
TM2D3-208ENST00000559891 NAALADL1Q9UQQ1 740 aa12.13□□□□□ -0.47
TM2D3-208ENST00000559891 A0A1W2PQH9 124 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 TMEM110-MUSTN1A8MSY1 372 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 GOLGA8KD6RF30 607 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 CALB1P05937 261 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 TCF4P15884 667 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 ATXN1P54253 815 aaKnown RBP12.12□□□□□ -0.47
TM2D3-208ENST00000559891 ZNF268Q14587 947 aaPredicted RBP12.12□□□□□ -0.47
TM2D3-208ENST00000559891 DNAJC21Q5F1R6 531 aaKnown RBP12.12□□□□□ -0.47
TM2D3-208ENST00000559891 PM20D1Q6GTS8 502 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 DNAJC24Q6P3W2 148 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 EMBQ6PCB8 327 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 POTEHQ6S545 545 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 TMC5Q6UXY8 1006 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 C3orf20Q8ND61 904 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 ADAM32Q8TC27 787 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 CFAP57Q96MR6 1250 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 DMGDHQ9UI17 866 aaKnown RBP12.12□□□□□ -0.47
TM2D3-208ENST00000559891 NOTCH4Q99466 2003 aa12.12□□□□□ -0.47
TM2D3-208ENST00000559891 MDM4O15151 490 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 TBX18O95935 607 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 KRT3P12035 628 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 CCR2P41597 374 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 NOP2P46087 812 aaKnown RBP12.11□□□□□ -0.47
TM2D3-208ENST00000559891 RPL10AP62906 217 aaKnown RBP12.11□□□□□ -0.47
TM2D3-208ENST00000559891 C15orf59Q2T9L4 293 aaPredicted RBP12.11□□□□□ -0.47
TM2D3-208ENST00000559891 PDE12Q6L8Q7 609 aaKnown RBP12.11□□□□□ -0.47
TM2D3-208ENST00000559891 SND1Q7KZF4 910 aaKnown RBP eCLIP12.11□□□□□ -0.474e-9■■□□□ 13.1
TM2D3-208ENST00000559891 ZNF564Q8TBZ8 553 aaPredicted RBP12.11□□□□□ -0.47
TM2D3-208ENST00000559891 HDAC7Q8WUI4 952 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 CAVIN3Q969G5 261 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 ZNF707Q96C28 371 aaPredicted RBP12.11□□□□□ -0.47
TM2D3-208ENST00000559891 VCPIP1Q96JH7 1222 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 SPATA17Q96L03 361 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 LRRC3Q9BY71 257 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 PNPLA8Q9NP80 782 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 IL37Q9NZH6 218 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 STIM2Q9P246 746 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 NCANO14594 1321 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 CCDC195A0A1B0GUA6 201 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 YWHAQP27348 245 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 ACADSBP45954 432 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 NNTQ13423 1086 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 GLE1Q53GS7 698 aaKnown RBP12.11□□□□□ -0.47
TM2D3-208ENST00000559891 PPM1LQ5SGD2 360 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 C10orf76Q5T2E6 689 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 STXBP5Q5T5C0 1151 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 LIN9Q5TKA1 542 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 BSPRYQ5W0U4 402 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 ALS2CLQ60I27 953 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 GAREM2Q75VX8 874 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 DEFB106AQ8N104 65 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 RNF10Q8N5U6 811 aaKnown RBP12.11□□□□□ -0.47
TM2D3-208ENST00000559891 ARFGAP1Q8N6T3 406 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 MYLIPQ8WY64 445 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 RFFLQ8WZ73 363 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 FBXO32Q969P5 355 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 PSMG2Q969U7 264 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 TCEAL4Q96EI5 215 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 CORO1BQ9BR76 489 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 FAM107BQ9H098 131 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 NSUN3Q9H649 340 aaKnown RBP12.11□□□□□ -0.47
TM2D3-208ENST00000559891 IL21Q9HBE4 155 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 CNGB3Q9NQW8 809 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 PARVAQ9NVD7 372 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 DNMT3BQ9UBC3 853 aaKnown RBP12.11□□□□□ -0.47
TM2D3-208ENST00000559891 ANAPC7Q9UJX3 599 aa12.11□□□□□ -0.47
TM2D3-208ENST00000559891 TMEM191CA6NGB0 347 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 SIGLEC16A6NMB1 481 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 OPA1O60313 960 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 BUB1BO60566 1050 aaPredicted RBP12.1□□□□□ -0.47
TM2D3-208ENST00000559891 LRG1P02750 347 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 IRAK1P51617 712 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 NAP1L1P55209 391 aaKnown RBP12.1□□□□□ -0.47
TM2D3-208ENST00000559891 ATP11AP98196 1134 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 MESDQ14696 234 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 CCDC85BQ15834 202 aaPredicted RBP12.1□□□□□ -0.47
TM2D3-208ENST00000559891 CDO1Q16878 200 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 SLC5A9Q2M3M2 681 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 HABP4Q5JVS0 413 aaKnown RBP12.1□□□□□ -0.47
TM2D3-208ENST00000559891 CCDC181Q5TID7 509 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 OTUD1Q5VV17 481 aaPredicted RBP12.1□□□□□ -0.47
TM2D3-208ENST00000559891 EP400NLQ6ZTU2 488 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 SLC26A9Q7LBE3 791 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 TMC8Q8IU68 726 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 ST13P5Q8NFI4 369 aaPredicted RBP12.1□□□□□ -0.47
TM2D3-208ENST00000559891 RXFP2Q8WXD0 754 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 PPM1EQ8WY54 764 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 MAGEB5Q9BZ81 275 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 CCSER2Q9H7U1 834 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 AVENQ9NQS1 362 aaPredicted RBP12.1□□□□□ -0.47
TM2D3-208ENST00000559891 HSFX1Q9UBD0 423 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 RNF14Q9UBS8 474 aa12.1□□□□□ -0.47
TM2D3-208ENST00000559891 INTUQ9ULD6 942 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms