RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 HOXA6P31267 233 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 SLC6A11P48066 632 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 FNTBP49356 437 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 RGS7P49802 495 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 DAOAP59103 153 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 GAD2Q05329 585 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 EFEMP1Q12805 493 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 CNGA2Q16280 664 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 MEA1Q16626 185 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 EXOC3L4Q17RC7 722 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 HSP90AA4PQ58FG1 418 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 MIIPQ5JXC2 388 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 PMF1Q6P1K2 205 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 ENOSF1Q7L5Y1 443 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 SFTPA1Q8IWL2 248 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 SIX6OS1Q8N1H7 587 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 NDRG1Q92597 394 aaKnown RBP11.48□□□□□ -0.57
SPG11-216ENST00000559347 SECISBP2LQ93073 1101 aaKnown RBP11.48□□□□□ -0.57
SPG11-216ENST00000559347 ACDQ96AP0 544 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 CNGB3Q9NQW8 809 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 AJAP1Q9UKB5 411 aaPredicted RBP11.48□□□□□ -0.57
SPG11-216ENST00000559347 SMG5Q9UPR3 1016 aaKnown RBP11.48□□□□□ -0.57
SPG11-216ENST00000559347 NYNRINQ9P2P1 1898 aaKnown RBP11.48□□□□□ -0.57
SPG11-216ENST00000559347 RALGAPA1Q6GYQ0 2036 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 MYO18AQ92614 2054 aaKnown RBP11.48□□□□□ -0.57
SPG11-216ENST00000559347 GPR179Q6PRD1 2367 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 TNRC6BQ9UPQ9 1833 aaKnown RBP11.47□□□□□ -0.57
SPG11-216ENST00000559347 ANTXRLA6NF34 631 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 YJEFN3A6XGL0 299 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 BECN2A8MW95 431 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.47□□□□□ -0.57
SPG11-216ENST00000559347 E7ENQ6 273 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 KAT7O95251 611 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 LCP1P13796 627 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 PON1P27169 355 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 GNA15P30679 374 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 MFAP3P55082 362 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 SEC13P55735 322 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 ANO4Q32M45 955 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 CT47A1Q5JQC4 288 aaPredicted RBP11.47□□□□□ -0.57
SPG11-216ENST00000559347 HEATR6Q6AI08 1181 aaKnown RBP11.47□□□□□ -0.57
SPG11-216ENST00000559347 RSRC2Q7L4I2 434 aaKnown RBP11.47□□□□□ -0.57
SPG11-216ENST00000559347 SYT13Q7L8C5 426 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 WDR5BQ86VZ2 330 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 LONP2Q86WA8 852 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 TMEM25Q86YD3 366 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 CCDC26Q8TAB7 109 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 USP33Q8TEY7 942 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 CLEC4CQ8WTT0 213 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 SHC3Q92529 594 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 FAM81BQ96LP2 452 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 PNKPQ96T60 521 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 TUBGCP2Q9BSJ2 902 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 NDST4Q9H3R1 872 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 SIX2Q9NPC8 291 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 ACP6Q9NPH0 428 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 ARHGEF4Q9NR80 690 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 OLA1Q9NTK5 396 aaKnown RBP11.47□□□□□ -0.57
SPG11-216ENST00000559347 POLR3BQ9NW08 1133 aaPredicted RBP11.47□□□□□ -0.57
SPG11-216ENST00000559347 MARK1Q9P0L2 795 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 MARCH2Q9P0N8 246 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 DNAH14Q0VDD8 3507 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 SPTBN4Q9H254 2564 aa11.47□□□□□ -0.57
SPG11-216ENST00000559347 EP300Q09472 2414 aaPredicted RBP11.47□□□□□ -0.57
SPG11-216ENST00000559347 KCNJ18B7U540 433 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 NEDD8-MDP1E9PL57 170 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 PIK3R2O00459 728 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 CACNG3O60359 315 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 TULP3O75386 442 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 LETM1O95202 739 aaPredicted RBP11.46□□□□□ -0.57
SPG11-216ENST00000559347 KLKB1P03952 638 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 APODP05090 189 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 HMBSP08397 361 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 PRKCSHP14314 528 aaPredicted RBP11.46□□□□□ -0.57
SPG11-216ENST00000559347 TYRP14679 529 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 CORO1AP31146 461 aaKnown RBP11.46□□□□□ -0.57
SPG11-216ENST00000559347 GPD2P43304 727 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 RPL34P49207 117 aaKnown RBP11.46□□□□□ -0.57
SPG11-216ENST00000559347 COG7P83436 770 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 KCNJ12Q14500 433 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 DMC1Q14565 340 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 ARHGAP44Q17R89 818 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 VWA3BQ502W6 1294 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 BTBD8Q5XKL5 378 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 NAT16Q8N8M0 369 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 TERB1Q8NA31 727 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 IRGQQ8WZA9 623 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 EDEM1Q92611 657 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 RUBCNQ92622 972 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 PLD4Q96BZ4 506 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 P2RY11Q96G91 374 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 HSFY1Q96LI6 401 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 HHIPQ96QV1 700 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 BBS2Q9BXC9 721 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 ABCC13Q9NSE7 274 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 SAMSN1Q9NSI8 373 aaKnown RBP11.46□□□□□ -0.57
SPG11-216ENST00000559347 STRIP2Q9ULQ0 834 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 MMP17Q9ULZ9 603 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 SLC8A2Q9UPR5 921 aa11.46□□□□□ -0.57
SPG11-216ENST00000559347 NFE2L3Q9Y4A8 694 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms