RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 KIF9Q9HAQ2 790 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 LUC7LQ9NQ29 371 aaKnown RBP6.21□□□□□ -1.42
USP3-212ENST00000559276 THG1LQ9NWX6 298 aaKnown RBP6.21□□□□□ -1.42
USP3-212ENST00000559276 GOLGA6AQ9NYA3 693 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 RBAKQ9NYW8 714 aaPredicted RBP6.21□□□□□ -1.42
USP3-212ENST00000559276 ZMYM5Q9UJ78 669 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 CTNND2Q9UQB3 1225 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 SNX9Q9Y5X1 595 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 WNT6Q9Y6F9 365 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 NUP205Q92621 2012 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 AKAP13Q12802 2813 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 K7EQS6 105 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 TRIM66O15016 1216 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 EIF3HO15372 352 aaKnown RBP eCLIP6.2□□□□□ -1.42
USP3-212ENST00000559276 TGFB1I1O43294 461 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 HUS1O60921 280 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 TACC1O75410 805 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 AKAP3O75969 853 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 RHOBTB3O94955 611 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 GCNT3O95395 438 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 LCA5LO95447 670 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 FGFR1OPO95684 399 aaKnown RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 OLFM2O95897 454 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 SYF2O95926 243 aaKnown RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 CST3P01034 146 aaPredicted RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 RPN1P04843 607 aaKnown RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 CD44P16070 742 aaKnown RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 GAP43P17677 238 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 DRD1P21728 446 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 PMLP29590 882 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 MAGEA11P43364 429 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 VAV2P52735 878 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 PSMC1P62191 440 aaKnown RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 RBP5P82980 135 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 TSPY1Q01534 308 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 UBXN1Q04323 297 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 KIF5AQ12840 1032 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 GRSF1Q12849 480 aaKnown RBP eCLIP6.2□□□□□ -1.42
USP3-212ENST00000559276 BFSP1Q12934 665 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 PDGFRLQ15198 375 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 SPA17Q15506 151 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 TAF12Q16514 161 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 N4BP2L1Q5TBK1 243 aaPredicted RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 STPG1Q5TH74 334 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 RRAGBQ5VZM2 374 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 KLHL10Q6JEL2 608 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 CEP68Q76N32 757 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 SV2BQ7L1I2 683 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 EPM2AIP1Q7L775 607 aaPredicted RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 SYT13Q7L8C5 426 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 CACNA2D4Q7Z3S7 1137 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 KIAA1328Q86T90 577 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 CBWD2Q8IUF1 395 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 ADGRF2Q8IZF7 708 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 MREGQ8N565 214 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 CAMKK1Q8N5S9 505 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 ARL14EPQ8N8R7 260 aaPredicted RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 ACRBPQ8NEB7 543 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 RASSF8Q8NHQ8 419 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 RPLP0P6Q8NHW5 317 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 SPATA18Q8TC71 538 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 ZNF507Q8TCN5 953 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 USP33Q8TEY7 942 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 NELFBQ8WX92 580 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 MRPS31Q92665 395 aaKnown RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 MYLPFQ96A32 169 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 FUBP3Q96I24 572 aaKnown RBP eCLIP6.2□□□□□ -1.42
USP3-212ENST00000559276 ERGIC2Q96RQ1 377 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 MYCBPQ99417 103 aaPredicted RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 P2RY13Q9BPV8 354 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 SELENOOQ9BVL4 669 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 TTLL2Q9BWV7 592 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 IRX2Q9BZI1 471 aaPredicted RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 TTYH3Q9C0H2 523 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 RNF38Q9H0F5 515 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 NUCKS1Q9H1E3 243 aaKnown RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 TMEM206Q9H813 350 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 RYDENQ9NUL5 291 aaKnown RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 EXOC1Q9NV70 894 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 PANK4Q9NVE7 773 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 DUS2Q9NX74 493 aaKnown RBP6.2□□□□□ -1.42
USP3-212ENST00000559276 EBF1Q9UH73 591 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 LCMT1Q9UIC8 334 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 ITGA11Q9UKX5 1188 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 SNX12Q9UMY4 172 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 ARHGAP26Q9UNA1 814 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 WASF3Q9UPY6 502 aa6.2□□□□□ -1.42
USP3-212ENST00000559276 PLXND1Q9Y4D7 1925 aa6.19□□□□□ -1.42
USP3-212ENST00000559276 CACNA1BQ00975 2339 aa6.19□□□□□ -1.42
USP3-212ENST00000559276 CHD6Q8TD26 2715 aa6.19□□□□□ -1.42
USP3-212ENST00000559276 TRAV19A0A0A6YYK7 116 aa6.19□□□□□ -1.42
USP3-212ENST00000559276 CES2O00748 559 aa6.19□□□□□ -1.42
USP3-212ENST00000559276 ATG13O75143 517 aa6.19□□□□□ -1.42
USP3-212ENST00000559276 LDHAP00338 332 aaKnown RBP6.19□□□□□ -1.42
USP3-212ENST00000559276 KRT19P08727 400 aa6.19□□□□□ -1.42
USP3-212ENST00000559276 USP17L7P0C7H9 530 aa6.19□□□□□ -1.42
USP3-212ENST00000559276 IDEP14735 1019 aa6.19□□□□□ -1.42
USP3-212ENST00000559276 BCKDHBP21953 392 aa6.19□□□□□ -1.42
USP3-212ENST00000559276 WARSP23381 471 aaKnown RBP6.19□□□□□ -1.42
USP3-212ENST00000559276 BDNFP23560 247 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms